RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TMEM120BA0PK00 339 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 TRPC5OSA6NMA1 111 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 TMCC2O75069 709 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 ADAM11O75078 769 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 CNOT4O95628 575 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 KITP10721 976 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 CCNA2P20248 432 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 CDKN2CP42773 168 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 CLK1P49759 484 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 ANXA11P50995 505 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 ATP5J2P56134 94 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 LRRC74AQ0VAA2 488 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 PDK3Q15120 406 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 STK11Q15831 433 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 LRRC74BQ6ZQY2 392 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 ATG4DQ86TL0 474 aaPredicted RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 UBE2J2Q8N2K1 259 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 FBXW5Q969U6 566 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 MUCL1Q96DR8 90 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 ZHX1-C8orf76Q96EF9 292 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 DNAJA3Q96EY1 480 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 ZBTB18Q99592 522 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 POTEKPQ9BYX7 375 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 OR11A1Q9GZK7 315 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 SLC38A1Q9H2H9 487 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 EXOSC3Q9NQT5 275 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 EMC3Q9P0I2 261 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 HDGFL3Q9Y3E1 203 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 IGKV3D-15A0A087WSY6 115 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 DPRXA6NFQ7 191 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 AGAP5A6NIR3 686 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 ZNF716A6NP11 495 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 SLCO1B7G3V0H7 640 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 AP3D1O14617 1153 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 GPR171O14626 319 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 SNNO75324 88 aaPredicted RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 PMS2P2O95744 297 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 IGHV3-9P01782 118 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 SOD3P08294 240 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 DANCRP0C864 163 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 NR2F1P10589 423 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 IL7RP16871 459 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 GGT1P19440 569 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 IGHV1-2P23083 117 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 HTR3AP46098 478 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 OR2B6P58173 313 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 RPS4XP62701 263 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 TXNL4AP83876 142 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 PLAURQ03405 335 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 GNA13Q14344 377 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 PPA1Q15181 289 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 COX20Q5RI15 118 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 FBXW9Q5XUX1 488 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 ATG16L1Q676U5 607 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 NXNQ6DKJ4 435 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 CCDC103Q8IW40 242 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 CMIPQ8IY22 773 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 GLB1L3Q8NCI6 653 aaPredicted RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 PNPT1Q8TCS8 783 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 MGARPQ8TDB4 240 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 SMAP2Q8WU79 429 aaPredicted RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 PMM1Q92871 262 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 NEUROG1Q92886 237 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 MANSC1Q9H8J5 431 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 TMEM181Q9P2C4 612 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 TRAPPC4Q9Y296 219 aa7.88□□□□□ -1.15
COPB1-211ENST00000534234 NOSIPQ9Y314 301 aaKnown RBP7.88□□□□□ -1.15
COPB1-211ENST00000534234 TMED7-TICAM2A0A0A6YYA0 188 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 CIB4A0PJX0 185 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 CFAP73A6NFT4 308 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 OVOL3O00110 214 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 RFXANKO14593 260 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 DNPH1O43598 174 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 RAMP1O60894 148 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 MRPL33O75394 65 aaKnown RBP7.87□□□□□ -1.15
COPB1-211ENST00000534234 SLC22A3O75751 556 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 PGM3O95394 542 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 KRT75O95678 551 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 IL6P05231 212 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 DBIP07108 87 aaKnown RBP7.87□□□□□ -1.15
COPB1-211ENST00000534234 CHRM4P08173 479 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 IDO1P14902 403 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 TACR3P29371 465 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 NTF4P34130 210 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 SLC1A3P43003 542 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 MAGEA8P43361 318 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 SLC18A1P54219 525 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 H3F3AP84243 136 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 ZNF672Q499Z4 452 aaPredicted RBP7.87□□□□□ -1.15
COPB1-211ENST00000534234 TIMM23BQ5SRD1 257 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 ABLIM2Q6H8Q1 611 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 SEZ6L2Q6UXD5 910 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 DNAJC14Q6Y2X3 702 aaPredicted RBP7.87□□□□□ -1.15
COPB1-211ENST00000534234 SSX8Q7RTT4 187 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 P2RY8Q86VZ1 359 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 ZNF433Q8N7K0 673 aaPredicted RBP7.87□□□□□ -1.15
COPB1-211ENST00000534234 PIGXQ8TBF5 258 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 WDR60Q8WVS4 1066 aa7.87□□□□□ -1.15
COPB1-211ENST00000534234 GTPBP3Q969Y2 492 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms