RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 PGCP20142 388 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
CTSB-230ENST00000534149 RNF165Q6ZSG1 346 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 CCDC103Q8IW40 242 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 CCDC63Q8NA47 563 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 PSMA8Q8TAA3 256 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 SFXN5Q8TD22 340 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 TMEM234Q8WY98 164 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 OR5P2Q8WZ92 322 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 NMUR2Q9GZQ4 415 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 CTPS2Q9NRF8 586 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 ACER3Q9NUN7 267 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 OXSMQ9NWU1 459 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 MOKQ9UQ07 419 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 AMDHD2Q9Y303 409 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 TMEM233B4DJY2 109 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 PMS2P2O95744 297 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 CHEK2O96017 543 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 CPA3P15088 417 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 ZNF23P17027 643 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 ITGA2P17301 1181 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 SOAT1P35610 550 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 SLC16A1P53985 500 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 ZNF141Q15928 474 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 CCDC153Q494R4 210 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 KANK2Q63ZY3 851 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 DDIASQ8IXT1 998 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 C17orf78Q8N4C9 275 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
CTSB-230ENST00000534149 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 OR11A1Q9GZK7 315 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 BPESC1Q9GZL8 116 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 SERHL2Q9H4I8 314 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 SLC7A10Q9NS82 523 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 CHRNA9Q9UGM1 479 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 DCTN4Q9UJW0 460 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 MKLN1Q9UL63 735 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 DNAJC15Q9Y5T4 150 aa13.05□□□□□ -0.32
CTSB-230ENST00000534149 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
CTSB-230ENST00000534149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
CTSB-230ENST00000534149 TENM1Q9UKZ4 2725 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 LOC390937A0A1W2PQ73 354 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 TMEM114B3SHH9 223 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 PIP5K1BO14986 540 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 CFLARO15519 480 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 TCF21O43680 179 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 FCMRO60667 390 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 BCAS1O75363 584 aaPredicted RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 UGT2B17O75795 530 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 URI1O94763 535 aaPredicted RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 RPL3P39023 403 aaKnown RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 APOBEC1P41238 236 aaKnown RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 MAGEA8P43361 318 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 OR2B6P58173 313 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 SNRPD2P62316 118 aaKnown RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 PTGR1Q14914 329 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 SLC46A3Q7Z3Q1 461 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 RFLNBQ8N5W9 214 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 C1orf162Q8NEQ5 155 aaPredicted RBP13.04□□□□□ -0.32
CTSB-230ENST00000534149 ZNF563Q8TA94 476 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 HDGFL3Q9Y3E1 203 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 DYSFO75923 2080 aa13.04□□□□□ -0.32
CTSB-230ENST00000534149 LRP5LA4QPB2 252 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 STX11O75558 287 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 SLU7O95391 586 aaKnown RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 CCNA2P20248 432 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 RYKP34925 604 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 PRPS1P60891 318 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 MAPK14Q16539 360 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 WHAMMP3Q1A5X7 153 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 LSM12Q3MHD2 195 aaKnown RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 TSPO2Q5TGU0 170 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 KLHL24Q6TFL4 600 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 EIF3MQ7L2H7 374 aaKnown RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 MEX3DQ86XN8 651 aaKnown RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 C10orf107Q8IVU9 208 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 CLEC4FQ8N1N0 589 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 KRTCAP2Q8N6L1 136 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 MOAP1Q96BY2 351 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 C1orf50Q9BV19 199 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 MYOZ1Q9NP98 299 aaPredicted RBP13.03□□□□□ -0.32
CTSB-230ENST00000534149 ATAD3AQ9NVI7 634 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
CTSB-230ENST00000534149 KLF11O14901 512 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 ANKRD28O15084 1053 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 DNPH1O43598 174 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 PEX11AO75192 247 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 WNT11O96014 354 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 AK1P00568 194 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 CHRNGP07510 517 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 CDH2P19022 906 aaPredicted RBP13.02□□□□□ -0.33
CTSB-230ENST00000534149 MATN1P21941 496 aa13.02□□□□□ -0.33
CTSB-230ENST00000534149 MAPK1P28482 360 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms