RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ZNF605Q86T29 641 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 ATG4DQ86TL0 474 aaPredicted RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 RBM45Q8IUH3 476 aaKnown RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 PIK3C3Q8NEB9 887 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 OR10Q1Q8NGQ4 319 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 OR14L1PQ8NHC6 308 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 NEIL3Q8TAT5 605 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 ZNF417Q8TAU3 575 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 POC1BQ8TC44 478 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 ADAMTS16Q8TE57 1224 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SLC25A43Q8WUT9 341 aaPredicted RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 FAR1Q8WVX9 515 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SLC38A4Q969I6 547 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 C3orf49Q96BT1 292 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 ZNF587Q96SQ5 575 aaPredicted RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 SEPHS2Q99611 448 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 PIP5K1AQ99755 562 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 KLHDC3Q9BQ90 382 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SERINC1Q9NRX5 453 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 AGPAT4Q9NRZ5 378 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 A4GNTQ9UNA3 340 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 VDAC3Q9Y277 283 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SPIN1Q9Y657 262 aaPredicted RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 HEATR5AQ86XA9 2040 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 A0A087WUJ7 227 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 OR2M5A3KFT3 312 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 HTR3EA5X5Y0 456 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 AQP7O14520 342 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 ADAMDEC1O15204 470 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 ZNF208O43345 1280 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 SEMA7AO75326 666 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 FKBP6O75344 327 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 TRAPPC6AO75865 159 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 KRT36O76013 467 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 IGF2P01344 180 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 FCGR1AP12314 374 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 RFC3P40938 356 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 TAS2R41P59536 307 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 HOXC5Q00444 222 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 TOMM20Q15388 145 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 ALG10BQ5I7T1 473 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 C3orf33Q6P1S2 294 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 LINC00114Q6XXX2 140 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 TRILQ7L0X0 811 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 SLCO4A1Q96BD0 722 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 SLC41A3Q96GZ6 507 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 HS6ST2Q96MM7 605 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 GPR137Q96N19 417 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 SLX1AQ9BQ83 275 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 ZNF426Q9BUY5 554 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 CHID1Q9BWS9 393 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 RIMS3Q9UJD0 308 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 OSGIN1Q9UJX0 560 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 AURKCQ9UQB9 309 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 AP4B1Q9Y6B7 739 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 V9GYQ6 96 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
COPB1-208ENST00000532088 TRGV5A0A0B4J1U4 118 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 A0A1W2PRQ8 180 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 OR14I1A6ND48 311 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 CPSF4LA6NMK7 179 aaKnown RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 GJE1A6NN92 205 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 HNRNPRO43390 633 aaKnown RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 GMFGO60234 142 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 RGS9O75916 674 aaPredicted RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 LYPD3O95274 346 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 EDN3P14138 238 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 TACR3P29371 465 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 RBM34P42696 430 aaKnown RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 HMGA2P52926 109 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 CDH12P55289 794 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 RAC1P63000 192 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 MERTKQ12866 999 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 DGCR6Q14129 220 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 TRAM2Q15035 370 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 COLEC12Q5KU26 742 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 WIPI1Q5MNZ9 446 aaPredicted RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 GDF7Q7Z4P5 450 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 ADGRG3Q86Y34 549 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 STK35Q8TDR2 534 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 ZNF524Q96C55 264 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
COPB1-208ENST00000532088 SFXN2Q96NB2 322 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 TMEM43Q9BTV4 400 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 FNDC11Q9BVV2 318 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 SLC19A3Q9BZV2 496 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 CTPS2Q9NRF8 586 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 AP4S1Q9Y587 144 aa11.29□□□□□ -0.6
COPB1-208ENST00000532088 TMED7-TICAM2A0A0A6YYA0 188 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 hCG_2039718K7EN88 272 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms