RNA–Protein interactions for RNA: ENST00000531413.5

CFL1-212, Transcript of cofilin 1, humanhuman

TSL 3 BASIC

Gene CFL1, Length 636 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-212ENST00000531413 HPGDP15428 266 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 RNF144AP50876 292 aaPredicted RBP13.3□□□□□ -0.28
CFL1-212ENST00000531413 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
CFL1-212ENST00000531413 OXLD1Q5BKU9 147 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 SLC25A53Q5H9E4 307 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 OTUD3Q5T2D3 398 aaPredicted RBP13.3□□□□□ -0.28
CFL1-212ENST00000531413 STEAP4Q687X5 459 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 ZNF771Q7L3S4 317 aaPredicted RBP13.3□□□□□ -0.28
CFL1-212ENST00000531413 RETREG3Q86VR2 466 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 CCDC103Q8IW40 242 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 LINC01006Q8NI28 216 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 PHOSPHO1Q8TCT1 267 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 MAIP1Q8WWC4 291 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 SGCDQ92629 289 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 RAB8BQ92930 207 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 MMP26Q9NRE1 261 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 UBQLN4Q9NRR5 601 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 FARSBQ9NSD9 589 aaKnown RBP13.3□□□□□ -0.28
CFL1-212ENST00000531413 RNF14Q9UBS8 474 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 CHMP2BQ9UQN3 213 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 AUP1Q9Y679 476 aa13.3□□□□□ -0.28
CFL1-212ENST00000531413 CXorf49A8MYA2 514 aaPredicted RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 PIP5K1CO60331 668 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 CDC14BO60729 498 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 ELK3P41970 407 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 ASMTP46597 345 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 EVX1P49640 407 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 P2RX1P51575 399 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 CSNK2A1P68400 391 aaPredicted RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 MGAT5Q09328 741 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 DLG1Q12959 904 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 PDCD1Q15116 288 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 PRSS53Q2L4Q9 553 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 TTC19Q6DKK2 380 aaPredicted RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 KRT80Q6KB66 452 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 CAVIN1Q6NZI2 390 aaKnown RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 R3HCC1LQ7Z5L2 792 aaKnown RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 GLB1L3Q8NCI6 653 aaPredicted RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 OR1K1Q8NGR3 316 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 PIGXQ8TBF5 258 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 ARL5BQ96KC2 179 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 RBBP8Q99708 897 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 SYT3Q9BQG1 590 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 QRSL1Q9H0R6 528 aaKnown RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 LEF1Q9UJU2 399 aaPredicted RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 PURGQ9UJV8 347 aaKnown RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 CARD8Q9Y2G2 431 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.29□□□□□ -0.28
CFL1-212ENST00000531413 WIPI2Q9Y4P8 454 aa13.29□□□□□ -0.28
CFL1-212ENST00000531413 LYSTQ99698 3801 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 RYR1P21817 5038 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 PPIAL4EA0A075B759 164 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 PPIAL4CA0A0B4J2A2 164 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 MYO1GB0I1T2 1018 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 PPIAL4DF5H284 164 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 OR7A17O14581 309 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 PIAS1O75925 651 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 NKX2-2O95096 273 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 PPIAL4FP0DN26 164 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 IGHV4-38-2P0DP08 117 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 ARL1P40616 181 aaPredicted RBP13.28□□□□□ -0.28
CFL1-212ENST00000531413 MAP3K8P41279 467 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 NCBP2P52298 156 aaKnown RBP eCLIP13.28□□□□□ -0.28
CFL1-212ENST00000531413 SUMO3P55854 103 aaPredicted RBP13.28□□□□□ -0.28
CFL1-212ENST00000531413 UBE2NP61088 152 aaKnown RBP13.28□□□□□ -0.28
CFL1-212ENST00000531413 DAG1Q14118 895 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 NDUFAF6Q330K2 333 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 FAM219BQ5XKK7 198 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 GAS2L3Q86XJ1 694 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 DNAJA3Q96EY1 480 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 TSPAN17Q96FV3 270 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 SLC30A2Q9BRI3 323 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 CHIAQ9BZP6 476 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
CFL1-212ENST00000531413 FLVCR1Q9Y5Y0 555 aa13.28□□□□□ -0.28
CFL1-212ENST00000531413 ARPC4-TTLL3A0A0A6YYG9 625 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 TTC36A6NLP5 189 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 SRRM5B3KS81 715 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 ETV2O00321 342 aaPredicted RBP13.27□□□□□ -0.29
CFL1-212ENST00000531413 ERLIN1O75477 346 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 KCNK2O95069 426 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 MPIG6BO95866 241 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 NAT2P11245 290 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 PAX7P23759 505 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 RAD52P43351 418 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 MAGEB1P43366 347 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 IFT88Q13099 833 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 ZNF154Q13106 437 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 PFKFB4Q16877 469 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 TIGD2Q4W5G0 525 aa13.27□□□□□ -0.29
CFL1-212ENST00000531413 HOXB13Q92826 284 aaPredicted RBP13.27□□□□□ -0.29
CFL1-212ENST00000531413 BCL2L2Q92843 193 aaPredicted RBP13.27□□□□□ -0.29
CFL1-212ENST00000531413 ELP4Q96EB1 424 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms