RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 KIAA0513O60268 411 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 AK1P00568 194 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 OR12D1P0DN82 309 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 CD40P25942 277 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 CLDN8P56748 225 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 TMEM249Q2WGJ8 235 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 TYW3Q6IPR3 259 aaKnown RBP16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 CLEC2AQ6UVW9 174 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 SSX8Q7RTT4 187 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 CCDC103Q8IW40 242 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 MUC15Q8N387 334 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 ZNF525Q8N782 197 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 EIF1ADQ8N9N8 165 aaKnown RBP16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 FAM71CQ8NEG0 241 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 OR4A15Q8NGL6 344 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 ZNF563Q8TA94 476 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 RAB8BQ92930 207 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 RADILQ96JH8 1075 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 PPP1R36Q96LQ0 422 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 ASB6Q9NWX5 421 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 CHRNA9Q9UGM1 479 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 NBEAL1Q6ZS30 2694 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 ITGA5P08648 1049 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 DHRS4L1P0CG22 281 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 CCNA2P20248 432 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 PTAFRP25105 342 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 APOBEC1P41238 236 aaKnown RBP16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 FABP6P51161 128 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 PLAURQ03405 335 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 FUT5Q11128 374 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 PDK3Q15120 406 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 C9orf135Q5VTT2 229 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 TNFAIP8L2Q6P589 184 aaPredicted RBP16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 KLHL17Q6TDP4 642 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 ANKRD46Q86W74 232 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 FBXL14Q8N1E6 418 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 OR52E4Q8NGH9 312 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 XAGE5Q8WWM1 108 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 ZG16BQ96DA0 208 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 ZHX1-C8orf76Q96EF9 292 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 TNFRSF13CQ96RJ3 184 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 MANSC1Q9H8J5 431 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 EXD2Q9NVH0 621 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 TAS2R16Q9NYV7 291 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 MGAT4BQ9UQ53 548 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 WDR45Q9Y484 360 aa16.19■□□□□ 0.18
SSSCA1-206ENST00000531405 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 PHF1O43189 567 aaPredicted RBP16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 PMS2P2O95744 297 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 CREB1P16220 341 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 SERPINB5P36952 375 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 OR2B6P58173 313 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 EMX2Q04743 252 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 RAB35Q15286 201 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 GABRA6Q16445 453 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 ADGRG3Q86Y34 549 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 PIGXQ8TBF5 258 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 MIPOL1Q8TD10 442 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 NANOS1Q8WY41 292 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 ROPN1LQ96C74 230 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 NOP53Q9NZM5 478 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 MALT1Q9UDY8 824 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 SLC35A3Q9Y2D2 325 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 SPIN1Q9Y657 262 aaPredicted RBP16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 ANK2Q01484 3957 aa16.18■□□□□ 0.18
SSSCA1-206ENST00000531405 RNASET2O00584 256 aaKnown RBP16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 MRPL33O75394 65 aaKnown RBP16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 LY6HO94772 140 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 CPSF4O95639 269 aaKnown RBP16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 C1QCP02747 245 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 FAM157CP0CG43 387 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 SLC16A1P53985 500 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 SLC25A3Q00325 362 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 MAD2L1Q13257 205 aaPredicted RBP16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 PDCD2Q16342 344 aaPredicted RBP16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 ATAD3BQ5T9A4 648 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 CASP12Q6UXS9 341 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 FRRS1Q6ZNA5 592 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 GRINAQ7Z429 371 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 WDR31Q8NA23 367 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 MUS81Q96NY9 551 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 ASIC5Q9NY37 505 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 HDGFL3Q9Y3E1 203 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 ATP23Q9Y6H3 246 aa16.17■□□□□ 0.18
SSSCA1-206ENST00000531405 ELOA3DA6NLF2 546 aaPredicted RBP16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 AP3D1O14617 1153 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 GPR171O14626 319 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 ANKRD28O15084 1053 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 ITM2AO43736 263 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 BPGMP07738 259 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 IDH2P48735 452 aaKnown RBP16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 DSCR9P59020 149 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 PHC1P78364 1004 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 VLDLRP98155 873 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 LOXL1Q08397 574 aaPredicted RBP16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 ELOA3BQ3SY89 546 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 DEPDC4Q8N2C3 294 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 RIBC1Q8N443 379 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms