RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CPSF4O95639 269 aaKnown RBP13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 PTAFRP25105 342 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 CD40P25942 277 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 ARRB2P32121 409 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 TTKP33981 857 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 APOBEC1P41238 236 aaKnown RBP13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 MAGEA8P43361 318 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 GPAT3Q53EU6 434 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 C6orf52Q5T4I8 152 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 ARFGAP2Q8N6H7 521 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 ZNF525Q8N782 197 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 RAB8BQ92930 207 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 ARL5BQ96KC2 179 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 DHRS9Q9BPW9 319 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 CCDC106Q9BWC9 280 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 DPY30Q9C005 99 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 GRIP2Q9C0E4 1043 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 UPB1Q9UBR1 384 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
CHMP4A-204ENST00000530996 STAB1Q9NY15 2570 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 CHD3Q12873 2000 aaKnown RBP13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 IGKV3D-15A0A087WSY6 115 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 E7EQL1 145 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 RNASET2O00584 256 aaKnown RBP13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 PGM3O95394 542 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 PMS2P2O95744 297 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 THBS1P07996 1170 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 ZNF16P17020 682 aaPredicted RBP13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 CLDN8P56748 225 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 DSCR9P59020 149 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 PDK3Q15120 406 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 MAPK14Q16539 360 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 TMEM249Q2WGJ8 235 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 EMBQ6PCB8 327 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 KLHL24Q6TFL4 600 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 DNM1P46Q6ZS02 220 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 GRINAQ7Z429 371 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 PHC2Q8IXK0 858 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 OR52E4Q8NGH9 312 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 FAM168AQ92567 244 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 ROPN1LQ96C74 230 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 PKNOX2Q96KN3 472 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 POLE3Q9NRF9 147 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 MALT1Q9UDY8 824 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 CDC42EP3Q9UKI2 254 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 HDGFL3Q9Y3E1 203 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 SLC25A15Q9Y619 301 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 PRR14LQ5THK1 2151 aa13.92□□□□□ -0.18
CHMP4A-204ENST00000530996 ZNF716A6NP11 495 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 DNAJA2O60884 412 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 BCAS1O75363 584 aaPredicted RBP13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 BMP4P12644 408 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 SLC25A16P16260 332 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 PGM1P36871 562 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 EMX2Q04743 252 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 OR7E24Q6IFN5 339 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 TYW3Q6IPR3 259 aaKnown RBP13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 C11orf71Q6IPW1 123 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 B3GLCTQ6Y288 498 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 CCDC103Q8IW40 242 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 FAM71CQ8NEG0 241 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 VPS37AQ8NEZ2 397 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 DDIT4LQ96D03 193 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 KCNK17Q96T54 332 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 ASIC5Q9NY37 505 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 MARCOQ9UEW3 520 aaPredicted RBP13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 SLC9A8Q9Y2E8 581 aa13.91□□□□□ -0.18
CHMP4A-204ENST00000530996 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 CLDN24A6NM45 220 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 PHF1O43189 567 aaPredicted RBP13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 DNPH1O43598 174 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 BPGMP07738 259 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 ITGA5P08648 1049 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 NUDT17P0C025 328 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 FAM157CP0CG43 387 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 UQCRC2P22695 453 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 IDH2P48735 452 aaKnown RBP13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 CHRNB3Q05901 458 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 FUT5Q11128 374 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 ANXA8L1Q5VT79 327 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 FRRS1Q6ZNA5 592 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 NUDCD3Q8IVD9 361 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 MIPOL1Q8TD10 442 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■■■■ 29
CHMP4A-204ENST00000530996 TNFRSF13CQ96RJ3 184 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 SLC35A5Q9BS91 424 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 INPP5KQ9BT40 448 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 BEX2Q9BXY8 128 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
CHMP4A-204ENST00000530996 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 WDR91A4D1P6 747 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 H7C417 338 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms