RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PANX1Q96RD7 426 aa18.49■□□□□ 0.55
SMPD1-204ENST00000530395 PNPOQ9NVS9 261 aa18.49■□□□□ 0.55
SMPD1-204ENST00000530395 CCDC154A6NI56 674 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 HMGN4O00479 90 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 GPR171O14626 319 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 BCAS1O75363 584 aaPredicted RBP18.48■□□□□ 0.55
SMPD1-204ENST00000530395 IGHV1-2P23083 117 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 PCSK6P29122 969 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 HTR3AP46098 478 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 NME5P56597 212 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 CHRNEQ04844 493 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 GNA13Q14344 377 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 SEZ6L2Q6UXD5 910 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 SPATA19Q7Z5L4 167 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 HMGN2P46Q86SG4 172 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 RNF130Q86XS8 419 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 CMIPQ8IY22 773 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 UBE2J2Q8N2K1 259 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 APH1AQ96BI3 265 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 TRNT1Q96Q11 434 aaKnown RBP18.48■□□□□ 0.55
SMPD1-204ENST00000530395 ZBTB18Q99592 522 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 AIG1Q9NVV5 245 aa18.48■□□□□ 0.55
SMPD1-204ENST00000530395 NOSIPQ9Y314 301 aaKnown RBP18.48■□□□□ 0.55
SMPD1-204ENST00000530395 DPRXA6NFQ7 191 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 SOD3P08294 240 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 ALDOCP09972 364 aaKnown RBP18.47■□□□□ 0.55
SMPD1-204ENST00000530395 DANCRP0C864 163 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 UQCRBP14927 111 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 EDNRAP25101 427 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 UFM1P61960 85 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 MPP2Q14168 576 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 TNFAIP8L3Q5GJ75 292 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 FBXW9Q5XUX1 488 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 ATG4DQ86TL0 474 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-204ENST00000530395 NEUROG1Q92886 237 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 ZG16BQ96DA0 208 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 OR52E6Q96RD3 313 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 ALG2Q9H553 416 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 FAIMQ9NVQ4 179 aa18.47■□□□□ 0.55
SMPD1-204ENST00000530395 MAGED1Q9Y5V3 778 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-204ENST00000530395 PRAMEF27A3QJZ7 478 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 TRPC5OSA6NMA1 111 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 ZNF716A6NP11 495 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 OVOL3O00110 214 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 SDHDO14521 159 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 PGRP06401 933 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 IDUAP35475 653 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 MAGEA8P43361 318 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 IDH2P48735 452 aaKnown RBP18.46■□□□□ 0.55
SMPD1-204ENST00000530395 OR2B6P58173 313 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 VEZF1Q14119 521 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 CLEC12BQ2HXU8 276 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 DNAJC14Q6Y2X3 702 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-204ENST00000530395 LRRC74BQ6ZQY2 392 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 ZNF621Q6ZSS3 439 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 ZNF433Q8N7K0 673 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-204ENST00000530395 ANKFN1Q8N957 763 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 ANKRD42Q8N9B4 389 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 WDR60Q8WVS4 1066 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 ARL5BQ96KC2 179 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 TEX37Q96LM6 180 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 TRIM2Q9C040 744 aa18.46■□□□□ 0.55
SMPD1-204ENST00000530395 CIB4A0PJX0 185 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 AGAP5A6NIR3 686 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 OR5H1A6NKK0 313 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 CLDN24A6NM45 220 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 HDAC3O15379 428 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 PGM3O95394 542 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 CCNA2P20248 432 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 POLR2HP52434 150 aaKnown RBP18.45■□□□□ 0.54
SMPD1-204ENST00000530395 SLC16A1P53985 500 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 CDH11P55287 796 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 TNK1Q13470 666 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 SYPL1Q16563 259 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 ADGRG3Q86Y34 549 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 GLB1L3Q8NCI6 653 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-204ENST00000530395 CNOT9Q92600 299 aaKnown RBP18.45■□□□□ 0.54
SMPD1-204ENST00000530395 PMM1Q92871 262 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 DDIT4LQ96D03 193 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 DNAJA3Q96EY1 480 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 OR11A1Q9GZK7 315 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 SLC38A1Q9H2H9 487 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 MTHFD2LQ9H903 347 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-204ENST00000530395 ASB6Q9NWX5 421 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 CISD1Q9NZ45 108 aaKnown RBP18.45■□□□□ 0.54
SMPD1-204ENST00000530395 TMEM181Q9P2C4 612 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 RAB21Q9UL25 225 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 TRAPPC4Q9Y296 219 aa18.45■□□□□ 0.54
SMPD1-204ENST00000530395 PLCE1Q9P212 2302 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 TMED7-TICAM2A0A0A6YYA0 188 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 CCT8L1PA6NM43 557 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 AP3D1O14617 1153 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 ZNF208O43345 1280 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 EIF1BO60739 113 aaKnown RBP18.44■□□□□ 0.54
SMPD1-204ENST00000530395 MRPL33O75394 65 aaKnown RBP18.44■□□□□ 0.54
SMPD1-204ENST00000530395 RAD51DO75771 328 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 KRT75O95678 551 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 IGHV3-9P01782 118 aa18.44■□□□□ 0.54
SMPD1-204ENST00000530395 DBIP07108 87 aaKnown RBP18.44■□□□□ 0.54
SMPD1-204ENST00000530395 CHRM4P08173 479 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms