RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ARGFXA6NJG6 315 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 MIF4GDA9UHW6 222 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 TMEM150CB9EJG8 249 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 C9J4A7 227 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 H7C0C1 242 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 BTN3A3O00478 584 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 NR5A2O00482 541 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SRPX2O60687 465 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SLC4A1P02730 911 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 FTH1P02794 183 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ZNF26P17031 533 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ADRA2CP18825 462 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 MMP11P24347 488 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 PSMB4P28070 264 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 PDHA2P29803 388 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 CYLC1P35663 651 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ATP5OP48047 213 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 NPY4RP50391 375 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 EIF3EP60228 445 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 OTUD4Q01804 1114 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 RELAQ04206 551 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ACVR1Q04771 509 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SPA17Q15506 151 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 PHKG1Q16816 387 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 NADK2Q4G0N4 442 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ZRANB3Q5FWF4 1079 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 TCTE1Q5JU00 501 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 UGT3A1Q6NUS8 523 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 NLRP9Q7RTR0 991 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SERPINA9Q86WD7 417 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 IQCKQ8N0W5 287 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ST6GALNAC3Q8NDV1 305 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 OR13C4Q8NGS5 318 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 ACTL9Q8TC94 416 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 KRT35Q92764 455 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SNRNP40Q96DI7 357 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 C10orf90Q96M02 699 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 GBP5Q96PP8 586 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 PANX2Q96RD6 677 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 RANBP9Q96S59 729 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 RUFY1Q96T51 708 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 TBL1YQ9BQ87 522 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 FRMD8P1Q9BZ68 369 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 WDR54Q9H977 334 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 LRRC40Q9H9A6 602 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 MRM3Q9HC36 420 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 GSN-AS1Q9NRJ2 163 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SOHLH2Q9NX45 425 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 NXT1Q9UKK6 140 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 PLCL2Q9UPR0 1127 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 PYGO1Q9Y3Y4 419 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 IGLV3-12A0A075B6K2 115 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 A0A087WW49 117 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 TRBV5-5A0A0J9YX44 114 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 A0A1B0GX78 115 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 GSAPA4D1B5 854 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 VSTM2BA6NLU5 285 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 AP3B1O00203 1094 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 OR2B3O76000 313 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 RAF1P04049 648 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 RPN2P04844 631 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 OR56A5P0C7T3 313 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 TPBGLP0DKB5 382 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 UGT2B7P16662 529 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 TIA1P31483 386 aaKnown RBP eCLIP4.06□□□□□ -1.764e-7■■■□□ 15
CSDE1-212ENST00000529046 FOXN2P32314 431 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 TSFMP43897 325 aaKnown RBP4.06□□□□□ -1.76
CSDE1-212ENST00000529046 UQCRFS1P47985 274 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 VEGFCP49767 419 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 ADARP55265 1226 aaKnown RBP4.06□□□□□ -1.76
CSDE1-212ENST00000529046 CDH17Q12864 832 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 SCARB2Q14108 478 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 ZIC1Q15915 447 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 INAQ16352 499 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 GTDC1Q4AE62 458 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 NKAIN1Q4KMZ8 207 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 ADAMTSL4-AS1Q5T5F5 129 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 UNC5DQ6UXZ4 953 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 C4orf22Q6V702 233 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 PPP1R21Q6ZMI0 780 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 HOOK3Q86VS8 718 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 LRRC6Q86X45 466 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 CCDC50Q8IVM0 306 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 PIANPQ8IYJ0 282 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 SLC22A15Q8IZD6 547 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 SYCE1Q8N0S2 351 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 ZADH2Q8N4Q0 377 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 CLDN19Q8N6F1 224 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 OR5AP2Q8NGF4 316 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 CCDC110Q8TBZ0 833 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 ASZ1Q8WWH4 475 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 N4BP2L2Q92802 583 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-212ENST00000529046 DNAJC1Q96KC8 554 aaKnown RBP4.06□□□□□ -1.76
CSDE1-212ENST00000529046 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 PKNOX2Q96KN3 472 aa4.06□□□□□ -1.76
CSDE1-212ENST00000529046 URM1Q9BTM9 101 aaKnown RBP4.06□□□□□ -1.76
CSDE1-212ENST00000529046 CARD6Q9BX69 1037 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms