RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CCDC169A6NNP5 214 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 TRDCB7Z8K6 153 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 LRATO95237 230 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 GNA14O95837 355 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 PGK1P00558 417 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 GAPDHP04406 335 aaKnown RBP3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 LGALS2P05162 132 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 P0C879 139 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 FNTAP49354 379 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 DAP3P51398 398 aaKnown RBP3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 ACTR3P61158 418 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 BEX3Q00994 111 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 FGL1Q08830 312 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 NCBP1Q09161 790 aaKnown RBP3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 BST1Q10588 318 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 ZMYND11Q15326 602 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 ATAD3CQ5T2N8 411 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 OR2G6Q5TZ20 316 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 OR5M10Q6IEU7 315 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 VITQ6UXI7 678 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 SH2D6Q7Z4S9 175 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 EGFL6Q8IUX8 553 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 OR56B2PQ8NGI1 322 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 OR2L2Q8NH16 312 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 OR56B4Q8NH76 319 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 KIR2DL4Q99706 377 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 ROPN1BQ9BZX4 212 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 SOGA1O94964 1423 aa3.42□□□□□ -1.86
HMGB1P1-201ENST00000522557 ARAP1Q96P48 1450 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 ZNF318Q5VUA4 2279 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 PHF3Q92576 2039 aaKnown RBP3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 HELTA6NFD8 242 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 FCN1O00602 326 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 HMMRO75330 724 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 ZNF254O75437 659 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 UPK3AO75631 287 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 CLDN9O95484 217 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 SERPINA3P01011 423 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 SEMG1P04279 462 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 FGF9P31371 208 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 CDH4P55283 916 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 CD47Q08722 323 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 DPYSL2Q16555 572 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 CARD16Q5EG05 197 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 KLF17Q5JT82 389 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 Q6ZR54 194 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 H2BFWTQ7Z2G1 175 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 HPS6Q86YV9 775 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 MCOLN2Q8IZK6 566 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 MAGEE2Q8TD90 523 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 FBXO32Q969P5 355 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 UBE2E3Q969T4 207 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 EFHD2Q96C19 240 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 C10orf35Q96D05 121 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 C12orf42Q96LP6 360 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 ZFP14Q9HCL3 533 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 TMEM9Q9P0T7 183 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 ZNF107Q9UII5 783 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 PHF11Q9UIL8 331 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 MOKQ9UQ07 419 aa3.41□□□□□ -1.86
HMGB1P1-201ENST00000522557 H0Y8G0 127 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 GFYI3L273 518 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 OR10H3O60404 316 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 N4BP1O75113 896 aaKnown RBP3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 DIRAS1O95057 198 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 IGHV3-48P01763 117 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 THY1P04216 161 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 CRYGBP07316 175 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 UQCRFS1P1P0C7P4 283 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 POLR2EP19388 210 aaKnown RBP3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 GDF1P27539 372 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 DDOSTP39656 456 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 ATP1B3P54709 279 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 SERTAD2Q14140 314 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 GK3PQ14409 553 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 ZNF77Q15935 545 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 AANATQ16613 207 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 OLFML2AQ68BL7 652 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 ZNF677Q86XU0 584 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 SLC22A9Q8IVM8 553 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 ALLCQ8N6M5 410 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 OR1L4Q8NGR5 311 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 ZPLD1Q8TCW7 415 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 CHCHD10Q8WYQ3 142 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 TPD52L3Q96J77 140 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 OXGR1Q96P68 337 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 OR5M11Q96RB7 305 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 TRIM62Q9BVG3 475 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 DEFB126Q9BYW3 111 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 NIPAL2Q9H841 368 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 VNN3Q9NY84 501 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 CTNNA3Q9UI47 895 aa3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 PRPF19Q9UMS4 504 aaKnown RBP3.4□□□□□ -1.87
HMGB1P1-201ENST00000522557 RPAP1Q9BWH6 1393 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P1-201ENST00000522557 CHD4Q14839 1912 aa3.39□□□□□ -1.87
HMGB1P1-201ENST00000522557 IGHV7-81A0A0B4J1V7 117 aa3.39□□□□□ -1.87
HMGB1P1-201ENST00000522557 A0A0G2JRQ6 117 aa3.39□□□□□ -1.87
HMGB1P1-201ENST00000522557 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
HMGB1P1-201ENST00000522557 ARHGEF35A5YM69 484 aa3.39□□□□□ -1.87
HMGB1P1-201ENST00000522557 DHRS7CA6NNS2 312 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms