RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CABYRO75952 493 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GAS8-AS1O95177 125 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GAPDHP04406 335 aaKnown RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 CAPN2P17655 700 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 POLR2EP19388 210 aaKnown RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 MAGEA8P43361 318 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 HNRNPA3P51991 378 aaKnown RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 ACTR3P61158 418 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GBE1Q04446 702 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZFP36L1Q07352 338 aaKnown RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 RUNX3Q13761 415 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GRB7Q14451 532 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 MESDQ14696 234 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZMYND11Q15326 602 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 LPAL2Q16609 132 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 PHYHD1Q5SRE7 291 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 PDZK1Q5T2W1 519 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 LIPNQ5VXI9 398 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 CXCL17Q6UXB2 119 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRPM8Q7Z2W7 1104 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 C16orf62Q7Z3J2 963 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GPR65Q8IYL9 337 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 POM121L12Q8N7R1 296 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 Q8N9G6 341 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 STXBP6Q8NFX7 210 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZBED6CLQ96FA7 236 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 NAP1L5Q96NT1 182 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 OR5B2Q96R09 309 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 TBX15Q96SF7 602 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 TUBGCP2Q9BSJ2 902 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GCOM2Q9BZD3 368 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 CRNKL1Q9BZJ0 848 aaKnown RBP2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 YY1AP1Q9H869 796 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZFP14Q9HCL3 533 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 NMRK1Q9NWW6 199 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 Q9UF83 564 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 PDE10AQ9Y233 779 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 GLI2P10070 1586 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 AK9Q5TCS8 1911 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 PREX1Q8TCU6 1659 aa2.6□□□□□ -1.99
HMGN1P28-201ENST00000521340 KNDC1Q76NI1 1749 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 MON2Q7Z3U7 1717 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 IQSEC2Q5JU85 1478 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 NRXN1Q9ULB1 1477 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 LMTK2Q8IWU2 1503 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 UGGT1Q9NYU2 1555 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 FAM240BA0A1B0GVZ2 78 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 E9PLD3 99 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 LRRTM2O43300 516 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 UPK3AO75631 287 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 NOL4O94818 638 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 TSPAN12O95859 305 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SERPINA3P01011 423 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 RNF224P0DH78 156 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SFTPCP11686 197 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 GATA1P15976 413 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 NPR2P20594 1047 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 PTBP1P26599 531 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 GDI1P31150 447 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 MAP3K8P41279 467 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 XCR1P46094 333 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 GNPDA1P46926 289 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 QARSP47897 775 aaKnown RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 VEGFCP49767 419 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 CRYBB1P53674 252 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 KRTAP10-5P60370 271 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 CUL1Q13616 776 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 GK3PQ14409 553 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 PRR4Q16378 134 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 PAN3Q58A45 887 aaKnown RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 C6orf226Q5I0X4 101 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 TCTEX1D4Q5JR98 221 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 GPRC6AQ5T6X5 926 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 OR8G2PQ6IF36 304 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 KCNIP4Q6PIL6 250 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 UQCC3Q6UW78 93 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 PAMR1Q6UXH9 720 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SLC25A42Q86VD7 318 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SERINC5Q86VE9 423 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 ALLCQ8N6M5 410 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 OR2A12Q8NGT7 310 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 TFB1MQ8WVM0 346 aaKnown RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 IL1F10Q8WWZ1 152 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 RASL10AQ92737 203 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 HAVCR1Q96D42 359 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SDSLQ96GA7 329 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 VSIG2Q96IQ7 327 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 C12orf42Q96LP6 360 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 NOL4LQ96MY1 436 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 CCT8L2Q96SF2 557 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SLC35A5Q9BS91 424 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 CHIAQ9BZP6 476 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 ROPN1BQ9BZX4 212 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 SENP1Q9P0U3 644 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 CSAG2Q9Y5P2 127 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 ALG6Q9Y672 507 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 RIMBP3CA6NJZ7 1639 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 RIMBP3BA6NNM3 1639 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 642.1 ms