RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 KLHL12Q53G59 568 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 ARMC4Q5T2S8 1044 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 ARHGAP11AQ6P4F7 1023 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 KLHL36Q8N4N3 616 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 OMA1Q96E52 524 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 B3GNT3Q9Y2A9 372 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 IGHV3-20A0A0C4DH32 117 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 LRRN3E7EW58 273 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 OR7A10O76100 309 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 CER1O95813 267 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 SOX6P35712 828 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 DAB2P98082 770 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 C17orf47Q8NEP4 570 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 OR5M3Q8NGP4 307 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 TRMT61AQ96FX7 289 aaKnown RBP24.28■■□□□ 1.48
COL13A1-210ENST00000517713 ERMAPQ96PL5 475 aaPredicted RBP24.28■■□□□ 1.48
COL13A1-210ENST00000517713 ASPNQ9BXN1 380 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 RTN4RQ9BZR6 473 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 ZNF337Q9Y3M9 751 aa24.28■■□□□ 1.48
COL13A1-210ENST00000517713 IGKV1D-42A0A075B6H8 117 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 SLC22A31A6NKX4 558 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 IDSB3KWA1 339 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 IFNGP01579 166 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 ABCD3P28288 659 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 PNLIPRP2P54317 469 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 TMED1Q13445 227 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 CRMP1Q14194 572 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 TRIM61Q5EBN2 209 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 BTLAQ7Z6A9 289 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 ANKRD37Q7Z713 158 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 UFD1Q92890 307 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 KISS1RQ969F8 398 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-210ENST00000517713 C6orf62Q9GZU0 229 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-210ENST00000517713 HTR3EA5X5Y0 456 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 PHF19Q5T6S3 580 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 OR52N1Q8NH53 320 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 TEAD3Q99594 435 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 TMEM43Q9BTV4 400 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 OR51V1Q9H2C8 321 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 CHRNA9Q9UGM1 479 aa24.27■■□□□ 1.48
COL13A1-210ENST00000517713 PNMA8CA0A1B0GUJ8 204 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 A0A1W2PQD3 144 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 CCDC182A6NF36 153 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 SLC6A8P48029 635 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 RPS7P62081 194 aaKnown RBP24.26■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF117Q03924 483 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 MARCH3Q86UD3 253 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 PPP1R3BQ86XI6 285 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 CYB561A3Q8NBI2 242 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF563Q8TA94 476 aa24.26■■□□□ 1.47
COL13A1-210ENST00000517713 GFM1Q96RP9 751 aaKnown RBP24.26■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF670-ZNF695F2Z2N8 137 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 MST1P26927 711 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF791Q3KP31 576 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-210ENST00000517713 OVCH1Q7RTY7 1134 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 ACBD7Q8N6N7 88 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 ALG1L2C9J202 215 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 MCIDASD6RGH6 385 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 NDUFB5O43674 189 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 ALOX12BO75342 701 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 IGF2P01344 180 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 SLC2A5P22732 501 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 SLC16A1P53985 500 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 RNF4P78317 190 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF385CQ66K41 422 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-210ENST00000517713 PRR23CQ6ZRP0 262 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 SPRYD4Q8WW59 207 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-210ENST00000517713 TMEM203Q969S6 136 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF524Q96C55 264 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 TBL1XR1Q9BZK7 514 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 APMAPQ9HDC9 416 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 SF3B6Q9Y3B4 125 aaKnown RBP24.25■■□□□ 1.47
COL13A1-210ENST00000517713 IER3IP1Q9Y5U9 82 aa24.25■■□□□ 1.47
COL13A1-210ENST00000517713 C12orf71A8MTZ7 269 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 HCRTR2O43614 444 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 DBPQ10586 325 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-210ENST00000517713 DPY19L2P2Q6ZN68 376 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 OR52E2Q8NGJ4 325 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 METTL21AQ8WXB1 218 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 KLHDC3Q9BQ90 382 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 SEMA4CQ9C0C4 833 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 TXNL4BQ9NX01 149 aaKnown RBP24.24■■□□□ 1.47
COL13A1-210ENST00000517713 OCIAD1Q9NX40 245 aa24.24■■□□□ 1.47
COL13A1-210ENST00000517713 SAGE2PA6NJ88 616 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 ONECUT2O95948 504 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 LALBAP00709 142 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 CLUP10909 449 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 CALRP27797 417 aaKnown RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 RPL4P36578 427 aaKnown RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 RPS19P39019 145 aaKnown RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 DUSP3P51452 185 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 RPS25P62851 125 aaKnown RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 ACSM1Q08AH1 577 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 SLC23A3Q6PIS1 610 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 ZNF322Q6U7Q0 402 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 TMEM99Q8N816 258 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 NFAM1Q8NET5 270 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 LRFN5Q96NI6 719 aa24.23■■□□□ 1.47
COL13A1-210ENST00000517713 NECAB3Q96P71 396 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-210ENST00000517713 TOR4AQ9NXH8 423 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms