RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ERLIN2O94905 339 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 VAPBO95292 243 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 BAG4O95429 457 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ANGPTL1O95841 491 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 IGHG3P01860 377 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 HLA-HP01893 362 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 UBTFL1P0CB47 393 aaPredicted RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 DPEP1P16444 411 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 PGAM1P18669 254 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NPR2P20594 1047 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 GIFP27352 417 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SAA4P35542 130 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 UGT2B10P36537 528 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 AQP2P41181 271 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NSG1P42857 185 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC1A1P43005 524 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 AMTP48728 403 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 EMDP50402 254 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 UBE2KP61086 200 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ABCE1P61221 599 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 RPS15AP62244 130 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 CDR2Q01850 454 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF33AQ06730 810 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 STX5Q13190 355 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 RIGQ13278 110 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 EIF2B1Q14232 305 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 GCKRQ14397 625 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 RAB35Q15286 201 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 TNXAQ16473 311 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ISXQ2M1V0 245 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 HLA-BQ31612 363 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 GTDC1Q4AE62 458 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 FAM106AQ4KMX7 169 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 RFTN2Q52LD8 501 aaPredicted RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 CYBRD1Q53TN4 286 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 C1orf220Q5T0J3 134 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ATP1A1-AS1Q5TC04 95 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 TIGD3Q6B0B8 471 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC25A47Q6Q0C1 308 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ATRAIDQ6UW56 229 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM207Q6UWW9 146 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 FAM151BQ6UXP7 276 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SFR1Q86XK3 245 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 CRLF3Q8IUI8 442 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 FBXL14Q8N1E6 418 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SYS1Q8N2H4 156 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SNX31Q8N9S9 440 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR5T1Q8NG75 326 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR56A4Q8NGH8 313 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 LYPD6BQ8NI32 183 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SETD7Q8WTS6 366 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM239Q8WW34 195 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 TM9SF4Q92544 642 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 TFGQ92734 400 aaPredicted RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 URB1-AS1Q96HZ7 61 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 B3GALT6Q96L58 329 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 C17orf77Q96MU5 243 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SERPINB11Q96P15 392 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF251Q9BRH9 671 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 PAPOLGQ9BWT3 736 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SSBP3Q9BWW4 388 aaPredicted RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 BEX2Q9BXY8 128 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 RAB34Q9BZG1 259 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ACTR3CQ9C0K3 210 aaPredicted RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 CSTL1Q9H114 145 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC38A1Q9H2H9 487 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 GLIPR2Q9H4G4 154 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NIPAL2Q9H841 368 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 PLAC1Q9HBJ0 212 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SIRT7Q9NRC8 400 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SAMSN1Q9NSI8 373 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 IMP3Q9NV31 184 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC17A6Q9P2U8 582 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 ABCD2Q9UBJ2 740 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 LNPEPQ9UIQ6 1025 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NXT1Q9UKK6 140 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 AGO1Q9UL18 857 aaKnown RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 OARD1Q9Y530 152 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 EVC2Q86UK5 1308 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 AQRO60306 1485 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 A0A0A6YYD4 124 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 IGLV9-49A0A0B4J1Y8 123 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TCRBV9S1A1TA0A576 114 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR6C70A6NIJ9 312 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 NKX6-3A6NJ46 265 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 H3BMQ9 156 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TOM1O60784 492 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 FZD7O75084 574 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 DUSP11O75319 330 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 PSIP1O75475 530 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 KHDRBS3O75525 346 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 CDK2AP2O75956 126 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 LDOC1O95751 146 aaPredicted RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 TSPAN15O95858 294 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 FADS2O95864 444 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 CD160O95971 181 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 JCHAINP01591 159 aa3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 DCNP07585 359 aaKnown RBP3.42□□□□□ -1.86
RNU4-60P-201ENST00000517239 UMODP07911 640 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms