RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 RNF217Q8TC41 542 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 M1APQ8TC57 530 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 FANK1Q8TC84 345 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 GPR119Q8TDV5 335 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 DUSP19Q8WTR2 217 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TTC9Q92623 222 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PTP4A1Q93096 173 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 MR1Q95460 341 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 NTNG2Q96CW9 530 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 LGALS12Q96DT0 336 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SGTBQ96EQ0 304 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TMEM80Q96HE8 168 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TAAR9Q96RI9 348 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 DDA1Q9BW61 102 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 JAM3Q9BX67 310 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TBL1XR1Q9BZK7 514 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 FN3KQ9H479 309 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ZBTB20Q9HC78 741 aaPredicted RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 MCCC2Q9HCC0 563 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TMEM9BQ9NQ34 198 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CMC2Q9NRP2 79 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 RYDENQ9NUL5 291 aaKnown RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TOR4AQ9NXH8 423 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 AKAP7Q9P0M2 348 aaPredicted RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CHRNA9Q9UGM1 479 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 IL20RAQ9UHF4 553 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PADI1Q9ULC6 663 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 DIMT1Q9UNQ2 313 aaKnown RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 BAIAP2Q9UQB8 552 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 EXOGQ9Y2C4 368 aaKnown RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 LSM2Q9Y333 95 aaKnown RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PTRH2Q9Y3E5 179 aaKnown RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ZNF337Q9Y3M9 751 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 LOXL2Q9Y4K0 774 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PCDHGB6Q9Y5F9 930 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PCDHGA3Q9Y5H0 932 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PCDHGA1Q9Y5H4 931 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 MUC6Q6W4X9 2439 aa4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PTPRZ1P23471 2315 aaPredicted RBP4.95□□□□□ -1.62
SCARNA20.4-201ENST00000516969 NCOA6Q14686 2063 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 IGLV3-32A0A0A0MS00 114 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 IRGMA1A4Y4 181 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PMS2P1A4D2B8 440 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ELOA3DA6NLF2 546 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SNTNA6NMZ2 147 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ENO4A6NNW6 628 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 C4orf47A7E2U8 309 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 C17orf51A8MQB3 221 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 B4DXG7 233 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 J3QRE1 110 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 WWP2O00308 870 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ETV2O00321 342 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 KPNA4O00629 521 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SOCS6O14544 535 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ARPC3O15145 178 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 IDH3BO43837 385 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 AHCYL1O43865 530 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 MAN1A2O60476 641 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CDC40O60508 579 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 LRP3O75074 770 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 NPIPB7O75200 414 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CSO75390 466 aaKnown RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 STK17BO94768 372 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CH25HO95992 272 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 IGHEP01854 428 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ASAH2BP0C7U1 165 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SAGP10523 405 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 COX6A1P12074 109 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PEPDP12955 493 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PGCP20142 388 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CCNA2P20248 432 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SLC2A5P22732 501 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TGM1P22735 817 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PSMB9P28065 219 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TACR3P29371 465 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 HTR1FP30939 366 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SLC6A6P31641 620 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PTGDSP41222 190 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 MTNR1AP48039 350 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SH3BGRP55822 239 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 PRPS1P60891 318 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 LTBQ06643 244 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CRYZQ08257 329 aaKnown RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 C17orf67Q0P5P2 114 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 NFATC3Q12968 1075 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ITGADQ13349 1161 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TMED1Q13445 227 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 AQP6Q13520 282 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CBFBQ13951 182 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 DOC2BQ14184 412 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 SSPNQ14714 243 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 EXT1Q16394 746 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 CSRP2Q16527 193 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ZNF74Q16587 644 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 NTRK2Q16620 822 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 TIGD6Q17RP2 521 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ZNF791Q3KP31 576 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ELOA3BQ3SY89 546 aa4.94□□□□□ -1.62
SCARNA20.4-201ENST00000516969 ANKDD1AQ495B1 522 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms