RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 KITP10721 976 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NCF1P14598 390 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ATP6V1B1P15313 513 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PGCP20142 388 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CD247P20963 164 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 JAK1P23458 1154 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PRPH2P23942 346 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 DCKP27707 260 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PIK3R1P27986 724 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PSMB5P28074 263 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PPP2R1BP30154 601 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GALNSP34059 522 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GPC1P35052 558 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MTNR1AP48039 350 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC1A6P48664 564 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KRT6CP48668 564 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HSPA13P48723 471 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HSPA7P48741 367 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 AGTR2P50052 363 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 BCAP31P51572 246 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HK2P52789 917 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PGGT1BP53609 377 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NAGLUP54802 743 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HSD17B7P56937 341 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TRA2BP62995 288 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TUBA4AP68366 448 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPS22P82650 360 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 IRF9Q00978 393 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MS4A2Q01362 244 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CLCQ05315 142 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 BSPH1Q075Z2 132 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CD300CQ08708 224 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HYAL2Q12891 473 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CSTF3Q12996 717 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CHIT1Q13231 466 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TMED1Q13445 227 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GTF2H2Q13888 395 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SLBPQ14493 270 aaKnown RBP eCLIP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SMU1Q2TAY7 513 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HKDC1Q2TB90 917 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TBRG1Q3YBR2 411 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KCTD21Q4G0X4 260 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC9B1Q4ZJI4 515 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PDCD4Q53EL6 469 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 UNC50Q53HI1 259 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 DCAF12L2Q5VW00 463 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PRAMEF9Q5VWM5 478 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KHDRBS2Q5VWX1 349 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 LIPMQ5VYY2 423 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FRG2Q64ET8 278 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FRMPD2BQ6IN97 320 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NANOGP8Q6NSW7 305 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GTF2H2CQ6P1K8 395 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 C8orf82Q6P1X6 216 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ZFP1Q6P2D0 407 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TMEM53Q6P2H8 277 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PLBD1Q6P4A8 553 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GALNT18Q6P9A2 607 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 EPGNQ6UW88 154 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MBOAT1Q6ZNC8 495 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 DCDC5Q6ZRR9 648 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 LANCL3Q6ZV70 420 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PAGE2Q7Z2X7 111 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TRIM46Q7Z4K8 759 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GOLGA7Q7Z5G4 137 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ADCK2Q7Z695 626 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 EPHX4Q8IUS5 362 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NUDCD3Q8IVD9 361 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CROCCP3Q8IVE0 287 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 WDR75Q8IWA0 830 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF595Q8IYB9 648 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SAMD14Q8IZD0 417 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 OR4N4Q8N0Y3 316 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FBXL14Q8N1E6 418 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ZCCHC7Q8N3Z6 543 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PTGR2Q8N8N7 351 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ANKRD53Q8N9V6 530 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ICA1LQ8NDH6 482 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PLPP5Q8NEB5 264 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TSPAN14Q8NG11 270 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 OR7G3Q8NG95 312 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CEP70Q8NHQ1 597 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CLDND2Q8NHS1 167 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 WDR20Q8TBZ3 569 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PIWIL2Q8TC59 973 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FAM110BQ8TC76 370 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC26A7Q8TE54 656 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GFM2Q969S9 779 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ATP6V1E2Q96A05 226 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GAL3ST3Q96A11 431 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 RGMAQ96B86 450 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MS4A6EQ96DS6 147 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PHF21BQ96EK2 531 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KTI12Q96EK9 354 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FAM46AQ96IP4 442 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FAR2Q96K12 515 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PTCHD1Q96NR3 888 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FRG2BQ96QU4 278 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 OR52B2Q96RD2 323 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SERPINI1Q99574 410 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms