RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PRAMEF7Q5VXH5 474 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 PARGQ86W56 976 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 CSNK1A1LQ8N752 337 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 ZNF433Q8N7K0 673 aaPredicted RBP3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 NFAM1Q8NET5 270 aaPredicted RBP3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 FGF14Q92915 247 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 MARC2Q969Z3 335 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 TMEM45BQ96B21 275 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 TSPAN18Q96SJ8 248 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 EPS15L1Q9UBC2 864 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 TRMT6Q9UJA5 497 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 KLK12Q9UKR0 248 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 NEUROG3Q9Y4Z2 214 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 NBEAL1Q6ZS30 2694 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 PCNX2A6NKB5 2137 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 ZBED9Q6R2W3 1325 aa3.21□□□□□ -1.89
TOPBP1-206ENST00000508524 ZNF532Q9HCE3 1301 aa3.21□□□□□ -1.89
TOPBP1-206ENST00000508524 MYH4Q9Y623 1939 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 AHCTF1Q8WYP5 2266 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 F8P00451 2351 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 SPAARA0A1B0GVQ0 90 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 NME2P1O60361 137 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 STK17BO94768 372 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF806P0C7X5 589 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 UBTFL1P0CB47 393 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 RPL32P62910 135 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 ORC2Q13416 577 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 RAB35Q15286 201 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 MARCH8Q5T0T0 291 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 IRGCQ6NXR0 463 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 DEFB124Q8NES8 71 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 PPTC7Q8NI37 304 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 SRSF12Q8WXF0 261 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF707Q96C28 371 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 TAAR1Q96RJ0 339 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 IL4I1Q96RQ9 567 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 CRNKL1Q9BZJ0 848 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 GLT8D2Q9H1C3 349 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 ABCG8Q9H221 673 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 CLMPQ9H6B4 373 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF331Q9NQX6 463 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 FAM114A2Q9NRY5 505 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 SPAG17Q6Q759 2223 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 ATG2BQ96BY7 2078 aa3.21□□□□□ -1.9
TOPBP1-206ENST00000508524 CLUHO75153 1309 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 NRCAMQ92823 1304 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 COL4A2P08572 1712 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 NMT2O60551 498 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 CA11O75493 328 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 LGALS2P05162 132 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 AREGP15514 252 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 CYP11B1P15538 503 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 MARCKSP29966 332 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 RBMXP38159 391 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 CNN1P51911 297 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 NTHL1P78549 312 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 SMU1Q2TAY7 513 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 CMPK2Q5EBM0 449 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 AGBL2Q5U5Z8 902 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 PNCKQ6P2M8 343 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 Q6ZS52 159 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 AMZ2Q86W34 360 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 GMCL1P1Q8NEA9 526 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF397Q8NF99 534 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 DNAJB3Q8WWF6 145 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 PTP4A1Q93096 173 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 EDEM2Q9BV94 578 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 ABCG4Q9H172 646 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 FAM124BQ9H5Z6 455 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 EHFQ9NZC4 300 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 COPS7AQ9UBW8 275 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 RAB23Q9ULC3 237 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 ISY1Q9ULR0 285 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 PLXNB3Q9ULL4 1909 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 BSNQ9UPA5 3926 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 SHROOM3Q8TF72 1996 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 TACC2O95359 2948 aa3.2□□□□□ -1.9
TOPBP1-206ENST00000508524 ZMYM6O95789 1325 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 CCDC69A6NI79 296 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 MMP23AO75900 390 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 CXCL14O95715 111 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 SEMG1P04279 462 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 TMOD1P28289 359 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 RPS9P46781 194 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 NOP14P78316 857 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF45Q02386 682 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 UBXN1Q04323 297 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 DPYSQ14117 519 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 CLLU1OSQ5K130 101 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 HACD2Q6Y1H2 254 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 FRA10AC1Q70Z53 315 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 GET4Q7L5D6 327 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 HSD17B13Q7Z5P4 300 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF410Q86VK4 478 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 IL22RA2Q969J5 263 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 CCDC51Q96ER9 411 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 DESI2Q9BSY9 194 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 PLA2G2FQ9BZM2 168 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms