RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 NR1H2P55055 460 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 MAGOHP61326 146 aaKnown RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 SYT14P1Q58G82 188 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 ANXA8L1Q5VT79 327 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 EIF3MQ7L2H7 374 aaKnown RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 CCDC103Q8IW40 242 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 LRRC34Q8IZ02 419 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 OR9I1Q8NGQ6 314 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 AURKBQ96GD4 344 aaPredicted RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 ROS1P08922 2347 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 AGAP5A6NIR3 686 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 GJE1A6NN92 205 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 HS3ST1O14792 307 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 HDAC3O15379 428 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 TP53P04637 393 aaPredicted RBP11.6□□□□□ -0.55
DDX41-204ENST00000504807 IMPDH2P12268 514 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 CHI3L1P36222 383 aaPredicted RBP11.6□□□□□ -0.55
DDX41-204ENST00000504807 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
DDX41-204ENST00000504807 KCNJ10P78508 379 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 RASGEF1BQ0VAM2 473 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 GPAT3Q53EU6 434 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 NCMAPQ5T1S8 102 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 HHATQ5VTY9 493 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 C20orf204Q6ZNR8 217 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 TMPPEQ6ZT21 453 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 KBTBD8Q8NFY9 601 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 AKAP1Q92667 903 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX41-204ENST00000504807 OR52E6Q96RD3 313 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 PANX1Q96RD7 426 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 GSX2Q9BZM3 304 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 OR10A4Q9H209 315 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 TMBIM4Q9HC24 238 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 TIGARQ9NQ88 270 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 EXD2Q9NVH0 621 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 RLIMQ9NVW2 624 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 PCDHGB4Q9UN71 923 aa11.6□□□□□ -0.55
DDX41-204ENST00000504807 PKD1L1Q8TDX9 2849 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■■□ 22.3
DDX41-204ENST00000504807 DSCAMO60469 2012 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 IGKV3D-15A0A087WSY6 115 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 UQCRHLA0A096LP55 91 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 TMEM72A0PK05 275 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 SOX30O94993 753 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 PRG2P13727 222 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 ETFAP13804 333 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 HOXB9P17482 250 aaPredicted RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 PGCP20142 388 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 COX5AP20674 150 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 PTNP21246 168 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 FPR1P21462 350 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 IDH2P48735 452 aaKnown RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 SPOCK1Q08629 439 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 TNK1Q13470 666 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 RPS26P11Q5JNZ5 115 aaPredicted RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 BEND6Q5SZJ8 279 aaPredicted RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 GTF2IRD2BQ6EKJ0 949 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 ZNF621Q6ZSS3 439 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 Q6ZT83 130 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 BHLHA15Q7RTS1 189 aaPredicted RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 SPATA19Q7Z5L4 167 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 GTF2IRD2Q86UP8 949 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 STK32CQ86UX6 486 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 VRK2Q86Y07 508 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 ZNF611Q8N823 705 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 ARL8AQ96BM9 186 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 REXO5Q96IC2 774 aaKnown RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 PLA2G12AQ9BZM1 189 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 EXOSC3Q9NQT5 275 aaKnown RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 POLE3Q9NRF9 147 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 ZNF701Q9NV72 531 aaPredicted RBP11.59□□□□□ -0.55
DDX41-204ENST00000504807 THAP1Q9NVV9 213 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 CHRNA9Q9UGM1 479 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 OSGIN1Q9UJX0 560 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 SLC35A3Q9Y2D2 325 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
DDX41-204ENST00000504807 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 A0A1W2PR80 420 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 ZNF724A8MTY0 619 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 SULT2B1O00204 365 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 CLOCKO15516 846 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 NDUFS7O75251 213 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 SNUPNO95149 360 aaKnown RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 NUDT7P0C024 238 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 DANCRP0C864 163 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 PABPC4LP0CB38 370 aaKnown RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 GKN3PP0CG01 181 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 PAX1P15863 534 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 H3F3AP84243 136 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 BSPH1Q075Z2 132 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 ITGADQ13349 1161 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 PGGHGQ32M88 737 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms