RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TMEM72A0PK05 275 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ENO4A6NNW6 628 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 SHISA8B8ZZ34 492 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 LRRN3E7EW58 273 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 G3V3Y1 287 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 M0R129 80 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 KPNA4O00629 521 aaPredicted RBP9.42□□□□□ -0.9
TPM3-217ENST00000504663 TP53I11O14683 189 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 PTP4A3O75365 173 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 TSPAN19P0C672 248 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 SMIM18P0DKX4 95 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 PRKAR1AP10644 381 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ITGA3P26006 1051 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 GGT2P36268 569 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 CD96P40200 585 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ESRRGP62508 458 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 RPP38P78345 283 aaKnown RBP9.42□□□□□ -0.9
TPM3-217ENST00000504663 EFNB1P98172 346 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 CD47Q08722 323 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 FOXO1Q12778 655 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 COX10Q12887 443 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 FOXF1Q12946 379 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 MED21Q13503 144 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 OXLD1Q5BKU9 147 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 TTC23Q5W5X9 447 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 IGFL2Q6UWQ7 119 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ISLR2Q6UXK2 745 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 THSD4Q6ZMP0 1018 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ENTHD1Q8IYW4 607 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 TMEM156Q8N614 296 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 CLDN22Q8N7P3 220 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 PSD4Q8NDX1 1056 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 OR4Q3Q8NH05 313 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 LIPHQ8WWY8 451 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ST8SIA1Q92185 356 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 UBE2FQ969M7 185 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 C1GALT1C1Q96EU7 318 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 SGCZQ96LD1 299 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 HS6ST2Q96MM7 605 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 USB1Q9BQ65 265 aaKnown RBP9.42□□□□□ -0.9
TPM3-217ENST00000504663 HES7Q9BYE0 225 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 DPH1Q9BZG8 443 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 SLC19A3Q9BZV2 496 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 EGLN3Q9H6Z9 239 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 ZNF226Q9NYT6 803 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 PPP4R1LQ9P1A2 415 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 DKK4Q9UBT3 224 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 AASSQ9UDR5 926 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 SIGLEC7Q9Y286 467 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 CDH10Q9Y6N8 788 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 CFAP47Q6ZTR5 3102 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 LAMA5O15230 3695 aa9.42□□□□□ -0.9
TPM3-217ENST00000504663 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 BSNQ9UPA5 3926 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 ZNF891A8MT65 544 aaPredicted RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 FTCDNL1E5RQL4 147 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 GNB5O14775 395 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 WBP4O75554 376 aaKnown RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 WDPCPO95876 746 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 F10P00742 488 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 BGLAPP02818 100 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 PNMTP11086 282 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 IFI30P13284 250 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 MSX1P28360 303 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 DNASE1L1P49184 302 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 RPS4XP62701 263 aaKnown RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 CDK5Q00535 292 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 IL1RL1Q01638 556 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 IL18R1Q13478 541 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 MAD2L1BPQ15013 274 aaPredicted RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 PTGES3Q15185 160 aaKnown RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 ZNF74Q16587 644 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 C1QL3Q5VWW1 255 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 TMEM236Q5W0B7 351 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 ACSM5Q6NUN0 579 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 GRINAQ7Z429 371 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 PLCZ1Q86YW0 608 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 CCDC103Q8IW40 242 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 IQCF1Q8N6M8 205 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 OR13C2Q8NGS9 318 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 KCNE4Q8WWG9 221 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 BPIFA2Q96DR5 249 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 KTI12Q96EK9 354 aaPredicted RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 MOGAT1Q96PD6 335 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 NR1H4Q96RI1 486 aaPredicted RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 UBL7Q96S82 380 aaPredicted RBP9.41□□□□□ -0.9
TPM3-217ENST00000504663 RNF32Q9H0A6 362 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 ING2Q9H160 280 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 UBQLN3Q9H347 655 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 MCCC2Q9HCC0 563 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 IL20Q9NYY1 176 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 RNF6Q9Y252 685 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 MED31Q9Y3C7 131 aa9.41□□□□□ -0.9
TPM3-217ENST00000504663 TMED7-TICAM2A0A0A6YYA0 188 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 UNC119BA6NIH7 251 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 BHLHE40O14503 412 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 OR7A10O76100 309 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 LYNP07948 512 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 GP1BBP13224 206 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 CDH2P19022 906 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms