RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CAV3P56539 151 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 OR1D5P58170 312 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 TAS2R43P59537 309 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CD300CQ08708 224 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 FNDC7Q5VTL7 733 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 XKRXQ6PP77 449 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 TMEM91Q6ZNR0 172 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SPEM1Q8N4L4 309 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 FAM98AQ8NCA5 519 aaKnown RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SDR9C7Q8NEX9 313 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 OR5M3Q8NGP4 307 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SMPDL3BQ92485 455 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 KIAA1143Q96AT1 154 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 TXNDC15Q96J42 360 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SLC46A1Q96NT5 459 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CCNL2Q96S94 520 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SLC19A3Q9BZV2 496 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 UBQLN4Q9NRR5 601 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 MUTYHQ9UIF7 546 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 FBXL4Q9UKA2 621 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 FER1L5A0AVI2 2057 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 IGKV3D-11A0A0A0MRZ8 115 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 SHISA3A0PJX4 238 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 FABP12A6NFH5 140 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 MCIDASD6RGH6 385 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 SNPHO15079 494 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 NUDT21O43809 227 aaKnown RBP11.96□□□□□ -0.49
GARNL3-220ENST00000496711 GYPBP06028 91 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 UBL4AP11441 157 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 HPGDP15428 266 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 CD53P19397 219 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 BCKDHBP21953 392 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 ALAS2P22557 587 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 RORAP35398 523 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 ADH7P40394 386 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 PPICP45877 212 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF85Q03923 595 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 CSTF1Q05048 431 aaKnown RBP11.96□□□□□ -0.49
GARNL3-220ENST00000496711 DBPQ10586 325 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-220ENST00000496711 INSL4Q14641 139 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 BAK1Q16611 211 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 PLXDC1Q8IUK5 500 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 TMEM151BQ8IW70 566 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF321PQ8N8H1 164 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 GATSQ8NAP1 163 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 OR52E2Q8NGJ4 325 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 OR5W2Q8NH69 310 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-220ENST00000496711 HPS1Q92902 700 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 TSLPQ969D9 159 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 CLIP3Q96DZ5 547 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 WNT16Q9UBV4 365 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF337Q9Y3M9 751 aa11.96□□□□□ -0.49
GARNL3-220ENST00000496711 SIRT4Q9Y6E7 314 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-220ENST00000496711 FRG2CA6NGY1 282 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 SCDO00767 359 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 OR7A10O76100 309 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 MTNR1BP49286 362 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 EIF2B2P49770 351 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 SKP2Q13309 424 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 TRAM1Q15629 374 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 CD226Q15762 336 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 LCN1P1Q5VSP4 162 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 FAAH2Q6GMR7 532 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 WBP2NLQ6ICG8 309 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 SIX5Q8N196 739 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 LRRC17Q8N6Y2 441 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 GDPD1Q8N9F7 314 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 OR4K13Q8NH42 304 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 OR1L3Q8NH93 324 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ATF6BQ99941 703 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 OR8D2Q9GZM6 311 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 NXF5Q9H1B4 397 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 TIGARQ9NQ88 270 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 EXOSC3Q9NQT5 275 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 DHCR7Q9UBM7 475 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 MRTO4Q9UKD2 239 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ZMIZ1Q9ULJ6 1067 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 IER3IP1Q9Y5U9 82 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 C2orf92A0A1B0GVN3 265 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 A0A1W2PQ09 198 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 HTR3EA5X5Y0 456 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ELOA3DA6NLF2 546 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 A8MUA0 341 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 LRRN3E7EW58 273 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 SSX4O60224 188 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 PRKNO60260 465 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 TMCC2O75069 709 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 NCR1O76036 304 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 PNMTP11086 282 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 FBLP22087 321 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 F8A1P23610 371 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 CSF2RBP32927 897 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 RPL4P36578 427 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms