RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 AP1ARQ63HQ0 302 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 ADAM5Q6NVV9 412 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF621Q6ZSS3 439 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 MTDHQ86UE4 582 aaKnown RBP11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 P2RY8Q86VZ1 359 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 ANKFN1Q8N957 763 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 LILRB1Q8NHL6 650 aaPredicted RBP11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 MGARPQ8TDB4 240 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF775Q96BV0 537 aaPredicted RBP11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CCDC115Q96NT0 180 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 OR52E6Q96RD3 313 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CHRNA9Q9UGM1 479 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 PRSS50Q9UI38 385 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 BTNL2Q9UIR0 455 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 LAMP3Q9UQV4 416 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 HDGFL3Q9Y3E1 203 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 DSCAMO60469 2012 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 A0A1W2PP18 115 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 SLCO1B7G3V0H7 640 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 AP3D1O14617 1153 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 RAMP1O60894 148 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 LY6G6DO95868 133 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 GSNP06396 782 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 KITP10721 976 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 GGT1P19440 569 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 NTF4P34130 210 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 MAGEA8P43361 318 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 MVDP53602 400 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 PDK3Q15120 406 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 PPA1Q15181 289 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 SLC9B1Q4ZJI4 515 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 RNF130Q86XS8 419 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 PIGXQ8TBF5 258 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 PNPT1Q8TCS8 783 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 CNOT9Q92600 299 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 PMM1Q92871 262 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 TLCD1Q96CP7 247 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 DDIT4LQ96D03 193 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 ARL5BQ96KC2 179 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 TRNT1Q96Q11 434 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 CCDC106Q9BWC9 280 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 SLC38A1Q9H2H9 487 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 ALG2Q9H553 416 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 CACYBPQ9HB71 228 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 EXOSC3Q9NQT5 275 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF701Q9NV72 531 aaPredicted RBP11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 FAIMQ9NVQ4 179 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 THAP1Q9NVV9 213 aa11.86□□□□□ -0.51
CTDSP1-212ENST00000494067 CIB4A0PJX0 185 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 CCDC154A6NI56 674 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 CCT8L1PA6NM43 557 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 HDAC3O15379 428 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 DNPH1O43598 174 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 MRPL33O75394 65 aaKnown RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 LYZL6O75951 148 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 KRT75O95678 551 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 PMS2P2O95744 297 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 NR2F1P10589 423 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 IL7RP16871 459 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 IDH2P48735 452 aaKnown RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 MAP2K6P52564 334 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 ETFDHQ16134 617 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 GTDC1Q4AE62 458 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 TIMM23BQ5SRD1 257 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 FBXW9Q5XUX1 488 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 ATG16L1Q676U5 607 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 GLB1L3Q8NCI6 653 aaPredicted RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 PIWIL2Q8TC59 973 aaKnown RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 SMAP2Q8WU79 429 aaPredicted RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 NEUROG1Q92886 237 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 MAELQ96JY0 434 aaKnown RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 NAA11Q9BSU3 229 aaPredicted RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 MTHFD2LQ9H903 347 aaPredicted RBP11.85□□□□□ -0.51
CTDSP1-212ENST00000494067 TMEM247A6NEH6 219 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 RFXANKO14593 260 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 EIF1BO60739 113 aaKnown RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 ANP32DO95626 131 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 IL6P05231 212 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 PGRP06401 933 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 CCNA2P20248 432 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 RPS4Y1P22090 263 aaKnown RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 IDUAP35475 653 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 POLR2HP52434 150 aaKnown RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 OR2B6P58173 313 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 MAGOHP61326 146 aaKnown RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 BSPH1Q075Z2 132 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF672Q499Z4 452 aaPredicted RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 ABLIM2Q6H8Q1 611 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 KLHL17Q6TDP4 642 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms