RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 SLC16A11Q8NCK7 471 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 NUP43Q8NFH3 380 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 OR52E4Q8NGH9 312 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 OR6Y1Q8NGX8 325 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 PHOSPHO1Q8TCT1 267 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 PPCDCQ96CD2 204 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 FCRL1Q96LA6 429 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 LRRC37BQ96QE4 947 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 TXLNGYQ9BZA5 131 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 REEP4Q9H6H4 257 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 ESM1Q9NQ30 184 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 CARD8Q9Y2G2 431 aa12.03□□□□□ -0.48
ATG4B-222ENST00000491867 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.48
ATG4B-222ENST00000491867 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 AKAP10O43572 662 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 PLIN3O60664 434 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 ERCC1P07992 297 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 MSMBP08118 114 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 FAM153BP0C7A2 387 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 DDX5P17844 614 aaKnown RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 LCN1P31025 176 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 SERPINB4P48594 390 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 PRPS1P60891 318 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 EFNB3Q15768 340 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 CCDC153Q494R4 210 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 FAM153CQ494X1 144 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 EXOSC6Q5RKV6 272 aaKnown RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 CCNJQ5T5M9 372 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 ABLIM2Q6H8Q1 611 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 FAHD2BQ6P2I3 314 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 IFT20Q8IY31 132 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 COX18Q8N8Q8 333 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 OR2T11Q8NH01 316 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 GPR119Q8TDV5 335 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 UBASH3BQ8TF42 649 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 WDR60Q8WVS4 1066 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 NEU4Q8WWR8 484 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 FAHD2AQ96GK7 314 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 TSSK3Q96PN8 268 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 KCNS3Q9BQ31 491 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 ACSS1Q9NUB1 689 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 OXSMQ9NWU1 459 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 ICAM5Q9UMF0 924 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 ACTL7BQ9Y614 415 aa12.02□□□□□ -0.49
ATG4B-222ENST00000491867 KMT2CQ8NEZ4 4911 aaKnown RBP12.02□□□□□ -0.49
ATG4B-222ENST00000491867 LOC105371242A0A075B767 164 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 PDLIM1O00151 329 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 SLC28A1O00337 649 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 PDE5AO76074 875 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 HSPA4LO95757 839 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 ALOX5P09917 674 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 NEFHP12036 1026 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 CCT5P48643 541 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 DIO1P49895 249 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 KHKP50053 298 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 P2RX1P51575 399 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 SUMO3P55854 103 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-222ENST00000491867 RPL38P63173 70 aaKnown RBP12.01□□□□□ -0.49
ATG4B-222ENST00000491867 PDK3Q15120 406 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 NDUFAF6Q330K2 333 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 ZCCHC12Q6PEW1 402 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 C1orf229Q6ZS94 237 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-222ENST00000491867 RNF165Q6ZSG1 346 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 ZDHHC22Q8N966 263 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 C1orf162Q8NEQ5 155 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-222ENST00000491867 CLHC1Q8NHS4 586 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 JADE3Q92613 823 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 OTUB1Q96FW1 271 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-222ENST00000491867 C16orf58Q96GQ5 468 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 SLC6A7Q99884 636 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 NARFLQ9H6Q4 476 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 SH3BP4Q9P0V3 963 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 BAIAP2L1Q9UHR4 511 aa12.01□□□□□ -0.49
ATG4B-222ENST00000491867 ZNF716A6NP11 495 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 SULT2B1O00204 365 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 KLF11O14901 512 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 AZIN1O14977 448 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 LSM1O15116 133 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 MRPL33O75394 65 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 HKR1P10072 659 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 CPA3P15088 417 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 ZFP36P26651 326 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 CRHR1P34998 444 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 SLC1A3P43003 542 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 TGFBR3Q03167 851 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 RFTN2Q52LD8 501 aaPredicted RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 SLC25A53Q5H9E4 307 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 LIPMQ5VYY2 423 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 C3orf33Q6P1S2 294 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 KLHL24Q6TFL4 600 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 LRIG3Q6UXM1 1119 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 MTDHQ86UE4 582 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 CCDC63Q8NA47 563 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 ZNF527Q8NB42 609 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 CLDND2Q8NHS1 167 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms