RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 TCRBV9S1A1TA0A576 114 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 OR6C65A6NJZ3 312 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 FAM159BA6NKW6 160 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 VSTM5A8MXK1 200 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 GTPBP1O00178 669 aaKnown RBP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 MANBAO00462 879 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 SCAMP2O15127 329 aaKnown RBP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 TP73O15350 636 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 DEAF1O75398 565 aaPredicted RBP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 SKAP2O75563 359 aaPredicted RBP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 CELA3BP08861 270 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 ANXA4P09525 319 aaPredicted RBP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 LCN1P31025 176 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 CCR4P51679 360 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 BTKQ06187 659 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 ACSM2AQ08AH3 577 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 HSPB3Q12988 150 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 SLC9A3R2Q15599 337 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 TBRG1Q3YBR2 411 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 KLHL26Q53HC5 615 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 SYT14P1Q58G82 188 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 GRTP1Q5TC63 336 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 ACSM2BQ68CK6 577 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 TMCO5AQ8N6Q1 288 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 JADE3Q92613 823 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 C16orf58Q96GQ5 468 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 GPR78Q96P69 363 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 ACPTQ9BZG2 426 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 MIEF1Q9NQG6 463 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 CRNNQ9UBG3 495 aaPredicted RBP11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 REV1Q9UBZ9 1251 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 FLVCR1Q9Y5Y0 555 aa11.74□□□□□ -0.53
EXOSC3-207ENST00000490516 ETV2O00321 342 aaPredicted RBP11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 TIMM23O14925 209 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 RP2O75695 350 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 NCR1O76036 304 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 OR4F21O95013 312 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 TSPAN15O95858 294 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 IGLV1-44P01699 117 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 C2P06681 752 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 TFPIP10646 304 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 MAGEA8P43361 318 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 ASMTP46597 345 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 SERPINB4P48594 390 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 CDH13P55290 713 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 MVKQ03426 396 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 MSMPQ1L6U9 139 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 ASPHD2Q6ICH7 369 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 SPATC1Q76KD6 591 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 SZRD1Q7Z422 152 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 COX18Q8N8Q8 333 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 OR5W2Q8NH69 310 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 ZHX1-C8orf76Q96EF9 292 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 BOD1Q96IK1 185 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 PBKQ96KB5 322 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 ARL5BQ96KC2 179 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 MRPL37Q9BZE1 423 aaKnown RBP11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 PARPBPQ9NWS1 579 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 TAS2R7Q9NYW3 318 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 NFU1Q9UMS0 254 aa11.73□□□□□ -0.53
EXOSC3-207ENST00000490516 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 PIP5K1BO14986 540 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 SYNGR3O43761 229 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 KLHL2O95198 593 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 LGI1O95970 557 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 OTCP00480 354 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 HSD3B1P14060 373 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 HSD3B2P26439 372 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 TYK2P29597 1187 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 ALDH3B1P43353 468 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 SEC24CP53992 1094 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 KRTAP10-3P60369 221 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 POU3F1Q03052 451 aaPredicted RBP11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 MERTKQ12866 999 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 SNTB2Q13425 540 aaKnown RBP11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 BEAN1Q3B7T3 259 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 SPIN4Q56A73 249 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 TECRLQ5HYJ1 363 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 FAM71E1Q6IPT2 247 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 PYROXD1Q8WU10 500 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 ARL8AQ96BM9 186 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 GPA33Q99795 319 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 SERINC1Q9NRX5 453 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 OXSMQ9NWU1 459 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 SLC9A8Q9Y2E8 581 aa11.72□□□□□ -0.53
EXOSC3-207ENST00000490516 A0A096LPE4 126 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 A0A1W2PPZ6 126 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 G3V4G9 280 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 H3BNH8 94 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 STX16-NPEPL1H3BU86 382 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 CLDN34H7C241 214 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms