RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 LDB3O75112 727 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 PTP4A3O75365 173 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 STX11O75558 287 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 AGR2O95994 175 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 PTHLHP12272 177 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 NID1P14543 1247 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 LCN1P31025 176 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 CLDN12P56749 244 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 RPS11P62280 158 aaKnown RBP eCLIP15.11■□□□□ 0.01
GCOM1-210ENST00000488175 RUNX2Q13950 521 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 MFSD13AQ14CX5 517 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 ARHGEF6Q15052 776 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 AGBL4Q5VU57 503 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 ZNF425Q6IV72 752 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 ZC3H14Q6PJT7 736 aaKnown RBP15.11■□□□□ 0.01
GCOM1-210ENST00000488175 SPRED2Q7Z698 418 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 FGD2Q7Z6J4 655 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 CDH24Q86UP0 819 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 TEX19Q8NA77 164 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 ZNF296Q8WUU4 475 aaPredicted RBP15.11■□□□□ 0.01
GCOM1-210ENST00000488175 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 RAB11FIP5Q9BXF6 653 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 SPATA2Q9UM82 520 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 STON1Q9Y6Q2 735 aa15.11■□□□□ 0.01
GCOM1-210ENST00000488175 TRAV1-2A0A0B4J238 106 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 LRRC72A6NJI9 287 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 PSMD9O00233 223 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 PEX14O75381 377 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 CEACAM5P06731 702 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 DBIP07108 87 aaKnown RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 THBS1P07996 1170 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 UGT2B7P16662 529 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 POLR2CP19387 275 aaPredicted RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 TSPAN5P62079 268 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 TNFRSF17Q02223 184 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 PLAURQ03405 335 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 FAAP20Q6NZ36 180 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 ZAR1Q86SH2 424 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 C12orf76Q8N812 135 aaPredicted RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 COX18Q8N8Q8 333 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 SLC25A18Q9H1K4 315 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 RPS6KB2Q9UBS0 482 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 KLK11Q9UBX7 282 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 GNG8Q9UK08 70 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 TRBV2A0A0J9YWF9 115 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 A0A1W2PP55 124 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 OR5K3A6NET4 321 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 M0R233 179 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 UBL4AP11441 157 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 TSFMP43897 325 aaKnown RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 CCR9P51686 369 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 RAB14P61106 215 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 CDK5R1Q15078 307 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 ZNF433Q8N7K0 673 aaPredicted RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 FAM98AQ8NCA5 519 aaKnown RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 OR2T4Q8NH00 348 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 SMIM19Q96E16 107 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 ERMAPQ96PL5 475 aaPredicted RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 SEC22CQ9BRL7 303 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 HRASLSQ9HDD0 168 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 PHPT1Q9NRX4 125 aaPredicted RBP15.1■□□□□ 0.01
GCOM1-210ENST00000488175 NTMQ9P121 344 aa15.1■□□□□ 0.01
GCOM1-210ENST00000488175 IMPA2O14732 288 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 SIRPAP78324 504 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 EXOSC7Q15024 291 aaKnown RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 UBE2Q1Q7Z7E8 422 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 CMIPQ8IY22 773 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 OR52I2Q8NH67 350 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 SNX33Q8WV41 574 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 ZNRF4Q8WWF5 429 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 WDR89Q96FK6 387 aaPredicted RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 C1QTNF7Q9BXJ2 289 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 PCDHGA9Q9Y5G4 932 aaKnown RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 MDC1Q14676 2089 aaKnown RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 GXYLT2A0PJZ3 443 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 IDSB3KWA1 339 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 P2RX6O15547 441 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 ADAM11O75078 769 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 ARL6IP5O75915 188 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 EML2O95834 649 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 SERPINA3P01011 423 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 ALDOBP05062 364 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 NGFRP08138 427 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 RRASP10301 218 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 HIST1H1CP16403 213 aaKnown RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 RAG2P55895 527 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 DYRK1AQ13627 763 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 RPL13AP3Q6NVV1 102 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 BPHLQ86WA6 291 aaPredicted RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 CNOT9Q92600 299 aaKnown RBP15.09■□□□□ 0.01
GCOM1-210ENST00000488175 GAL3ST3Q96A11 431 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 SARGQ9BW04 601 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 ACTR6Q9GZN1 396 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 NOX4Q9NPH5 578 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 POT1Q9NUX5 634 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 RDH8Q9NYR8 311 aa15.09■□□□□ 0.01
GCOM1-210ENST00000488175 PRELID1Q9Y255 219 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms