RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 RAP2BP61225 183 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 OR14L1PQ8NHC6 308 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 PPA2Q9H2U2 334 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 OR2A25A4D2G3 310 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 PCSK6P29122 969 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 DSC1Q08554 894 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 FNDC9Q8TBE3 224 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 ASB17Q8WXJ9 295 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 CA14Q9ULX7 337 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 RHBDD3Q9Y3P4 386 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 F5H5K5 113 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 YY2O15391 372 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 GPX2P18283 190 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 HLA-DMAP28067 261 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 CST5P28325 142 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-210ENST00000487017 BDKRB2P30411 391 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 ADPRMQ3LIE5 342 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 UNQ6126/PRO20091Q6UXV3 157 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 RFLNAQ6ZTI6 216 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 LILRB2Q8N423 598 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 OR1J4Q8NGS1 313 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 TMEM38AQ9H6F2 299 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 SLC9B1P1A6NJY1 282 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 DRD1P21728 446 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 SLC6A11P48066 632 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 MTNR1BP49286 362 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 RPE65Q16518 533 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 NXNL2Q5VZ03 156 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 NEURL3Q96EH8 262 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 MED20Q9H944 212 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 C1GALT1Q9NS00 363 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 DEFB103AP81534 67 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 CTBSQ01459 385 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 MC2RQ01718 297 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 TNFRSF17Q02223 184 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 ACY1Q03154 408 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 HYAL4Q2M3T9 481 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 VRK3Q8IV63 474 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 STEAP2Q8NFT2 490 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 UBQLN4Q9NRR5 601 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 A0A1B0GUL6 1792 aa15.33■□□□□ 0.05
COL7A1-210ENST00000487017 PEX14O75381 377 aa15.33■□□□□ 0.05
COL7A1-210ENST00000487017 ADOQ96SZ5 270 aa15.33■□□□□ 0.05
COL7A1-210ENST00000487017 NDUFAF4Q9P032 175 aa15.33■□□□□ 0.05
COL7A1-210ENST00000487017 ADAM18Q9Y3Q7 739 aa15.33■□□□□ 0.05
COL7A1-210ENST00000487017 ANKRD12Q6UB98 2062 aa15.33■□□□□ 0.05
COL7A1-210ENST00000487017 UBBP0CG47 229 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 UBCP0CG48 685 aaKnown RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 SNRPBP14678 240 aaKnown RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 RPS27AP62979 156 aaKnown RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 UBA52P62987 128 aaKnown RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 NLRP8Q86W28 1048 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 ZNF419Q96HQ0 510 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 QRSL1Q9H0R6 528 aaKnown RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 ELOVL3Q9HB03 270 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 SNX11Q9Y5W9 270 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 LIPCP11150 499 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 PVRP15151 417 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 LIPAP38571 399 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 TAS2R20P59543 309 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 DLEU7Q6UYE1 221 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 CMTM1Q8IZ96 169 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 CELF2-AS1Q8N7Q2 184 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 POLHQ9Y253 713 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 SULT1C2O00338 296 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 CASP6P55212 293 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 UBE2NP61088 152 aaKnown RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 REEP5Q00765 189 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 CD163Q86VB7 1156 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 LYSMD2Q8IV50 215 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 MS4A8Q9BY19 250 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 METTL17Q9H7H0 456 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-210ENST00000487017 PGAP2Q9UHJ9 254 aa15.33■□□□□ 0.04
COL7A1-210ENST00000487017 DVL2O14641 736 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 IFNA17P01571 189 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 RAC2P15153 192 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 SPOCK1Q08629 439 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 FAM3CQ92520 227 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 SORCS2Q96PQ0 1159 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 UHRF1Q96T88 793 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-210ENST00000487017 AMBRA1Q9C0C7 1298 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 LRFN1Q9P244 771 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 CPNE7Q9UBL6 633 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 A0A0U1RQK1 487 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 ACTL6BO94805 426 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 ZNF585AQ6P3V2 769 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 ZNF852Q6ZMS4 543 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 OR56B2PQ8NGI1 322 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 OR52I1Q8NGK6 324 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 STK35Q8TDR2 534 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 PSD2Q9BQI7 771 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 HENMT1Q5T8I9 393 aaKnown RBP15.32■□□□□ 0.04
COL7A1-210ENST00000487017 SFXN4Q6P4A7 337 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 ABHD12BQ7Z5M8 362 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-210ENST00000487017 MPPED1O15442 326 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 PFN3P60673 137 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 PLGLAQ15195 96 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 OR4M1Q8NGD0 313 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 CHTF18Q8WVB6 975 aa15.32■□□□□ 0.04
COL7A1-210ENST00000487017 TM4SF18Q96CE8 201 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms