RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 HAT1O14929 419 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 IL1BP01584 269 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 IGKV3-15P01624 115 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 SEMG1P04279 462 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 LGALS2P05162 132 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 P0C879 139 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 POU2F1P14859 743 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 HMGB2P26583 209 aaKnown RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 CASP4P49662 377 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 EFNB2P52799 333 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 DIO3P55073 304 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 RIPK4P57078 832 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 C1orf61Q13536 156 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 ELAVL3Q14576 367 aaKnown RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 ARL6IP1Q15041 203 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 PRR30Q53SZ7 412 aaPredicted RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 WDR74Q6RFH5 385 aaPredicted RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 UTS2BQ765I0 119 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 TMEM179BQ7Z7N9 219 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 ZNF589Q86UQ0 364 aaPredicted RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 C17orf82Q86X59 251 aaPredicted RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 OR10H4Q8NGA5 316 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 PAQR8Q8TEZ7 354 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 SHC3Q92529 594 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 ZNF184Q99676 751 aaPredicted RBP3.34□□□□□ -1.87
SMC4-218ENST00000486711 POPDC2Q9HBU9 364 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 ONECUT1Q9UBC0 465 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 ERVW-1Q9UQF0 538 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 CA5BQ9Y2D0 317 aa3.34□□□□□ -1.87
SMC4-218ENST00000486711 TNRQ92752 1358 aa3.34□□□□□ -1.88
SMC4-218ENST00000486711 IGHV1OR15-1A0A075B7D0 117 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 HELTA6NFD8 242 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 TUBAL3A6NHL2 446 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 VSTM2BA6NLU5 285 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 CXCL11O14625 94 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 RGS16O15492 202 aaPredicted RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 MED7O43513 233 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 PFKFB2O60825 505 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 SURF6O75683 361 aaKnown RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 DIRAS1O95057 198 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 IGHV3-23P01764 117 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 COX5AP20674 150 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 RDXP35241 583 aaKnown RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 RGRP47804 291 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 CCT3P49368 545 aaKnown RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 MAJINQ3KP22 176 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 FILIP1LQ4L180 1135 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 OR4F3Q6IEY1 312 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 GDPD3Q7L5L3 318 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 C14orf178Q8N769 122 aaPredicted RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 OR5D13Q8NGL4 314 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 SEC22AQ96IW7 307 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 CLCC1Q96S66 551 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 SECISBP2Q96T21 854 aaKnown RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 COPS8Q99627 209 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 GAL3ST1Q99999 423 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 ZNF670Q9BS34 389 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 NICN1Q9BSH3 213 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 GCOM2Q9BZD3 368 aaPredicted RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 POLDIP2Q9Y2S7 368 aa3.33□□□□□ -1.88
SMC4-218ENST00000486711 RPAP1Q9BWH6 1393 aaPredicted RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 ZNF646O15015 1829 aaPredicted RBP3.33□□□□□ -1.88
SMC4-218ENST00000486711 A0A1B0GUS0 222 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 EPOPA6NHQ4 379 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 IDSB3KWA1 339 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 GOLGA8SH3BPF8 625 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 ATP5LO75964 103 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 IGHDP01880 384 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 HSPB1P04792 205 aaKnown RBP3.32□□□□□ -1.88
SMC4-218ENST00000486711 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 PCMT1P22061 227 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 ZBTB25P24278 435 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 GNA11P29992 359 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 HTR1FP30939 366 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 MAP3K8P41279 467 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 PKNOX1P55347 436 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 ZNF45Q02386 682 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 ASPHQ12797 758 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 SFT2D3Q587I9 215 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 FHL5Q5TD97 284 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 ACOT7LQ6ZUV0 252 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 LRRC75A-AS1Q8N1F1 130 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 MFSD9Q8NBP5 474 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 OR56B4Q8NH76 319 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 ST8SIA1Q92185 356 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 PGLYRP4Q96LB8 373 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 CNOT6LQ96LI5 555 aaKnown RBP3.32□□□□□ -1.88
SMC4-218ENST00000486711 PARD6BQ9BYG5 372 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 MAGT1Q9H0U3 335 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 NHEJ1Q9H9Q4 299 aaPredicted RBP3.32□□□□□ -1.88
SMC4-218ENST00000486711 POLE4Q9NR33 117 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 CD274Q9NZQ7 290 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 BFARQ9NZS9 450 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 TMCO1Q9UM00 188 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 HPCAL4Q9UM19 191 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 KANK1Q14678 1352 aa3.32□□□□□ -1.88
SMC4-218ENST00000486711 CFAP65Q6ZU64 1925 aaKnown RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 TTC21BQ7Z4L5 1316 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 ZFP92A6NM28 416 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms