RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 FBXW9Q5XUX1 488 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 TMEM108Q6UXF1 575 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 CASP12Q6UXS9 341 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 C6orf120Q7Z4R8 191 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 MUC15Q8N387 334 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 OR10H5Q8NGA6 315 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 TUBGCP3Q96CW5 907 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 TNFRSF13CQ96RJ3 184 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 KCNK17Q96T54 332 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 DHRS9Q9BPW9 319 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 CCDC106Q9BWC9 280 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 BHLHE41Q9C0J9 482 aaPredicted RBP12.22□□□□□ -0.45
VARS-226ENST00000483275 ZNF350Q9GZX5 532 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 CBLN4Q9NTU7 201 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 ACER3Q9NUN7 267 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 ATP23Q9Y6H3 246 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 IGKV3D-15A0A087WSY6 115 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 GOLGA8QA0A0J9YX86 632 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 GOLGA8OA6NCC3 632 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 ATP6V1G2-DDX39BF2Z307 99 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 GOLGA8NF8WBI6 632 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 AP3D1O14617 1153 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 DNAJA2O60884 412 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 LYPLA1O75608 230 aaPredicted RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 FGF4P08620 206 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 DHRS4L1P0CG22 281 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 FAM157CP0CG43 387 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 OR12D1P0DN82 309 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 CREB1P16220 341 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 PGM1P36871 562 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 OR2B6P58173 313 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 CSNK2A1P68400 391 aaPredicted RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 PDCD2Q16342 344 aaPredicted RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 ARHGAP11BQ3KRB8 267 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 KRTAP24-1Q3LI83 254 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 EIF3MQ7L2H7 374 aaKnown RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 MTDHQ86UE4 582 aaKnown RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 FBXL14Q8N1E6 418 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 FAM71CQ8NEG0 241 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 OR4A15Q8NGL6 344 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 ZNF563Q8TA94 476 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 AENQ8WTP8 325 aaKnown RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 MOAP1Q96BY2 351 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 ZG16BQ96DA0 208 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 PARD6BQ9BYG5 372 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 EML4Q9HC35 981 aaKnown RBP12.21□□□□□ -0.45
VARS-226ENST00000483275 SERINC1Q9NRX5 453 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 ASB6Q9NWX5 421 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 CHRNA9Q9UGM1 479 aa12.21□□□□□ -0.45
VARS-226ENST00000483275 PGCP20142 388 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 PRPS1L1P21108 318 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 VLDLRP98155 873 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 RAB35Q15286 201 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 GABRA6Q16445 453 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 TYW3Q6IPR3 259 aaKnown RBP12.2□□□□□ -0.46
VARS-226ENST00000483275 KLHL17Q6TDP4 642 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 P2RY8Q86VZ1 359 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 WDR31Q8NA23 367 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 SLC25A43Q8WUT9 341 aaPredicted RBP12.2□□□□□ -0.46
VARS-226ENST00000483275 XAGE5Q8WWM1 108 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 TMEM234Q8WY98 164 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 FAM168AQ92567 244 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 ARL8AQ96BM9 186 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 C3orf49Q96BT1 292 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 RADILQ96JH8 1075 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 PRPF18Q99633 342 aaKnown RBP12.2□□□□□ -0.46
VARS-226ENST00000483275 CHODLQ9H9P2 273 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 TAS2R16Q9NYV7 291 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 MALT1Q9UDY8 824 aa12.2□□□□□ -0.46
VARS-226ENST00000483275 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 CPSF4O95639 269 aaKnown RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 NUDT17P0C025 328 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 CDH2P19022 906 aaPredicted RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 PTAFRP25105 342 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 LOXL1Q08397 574 aaPredicted RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 FRRS1Q6ZNA5 592 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 ADGRG3Q86Y34 549 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 PIGXQ8TBF5 258 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 CNOT9Q92600 299 aaKnown RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 ROPN1LQ96C74 230 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 ZHX1-C8orf76Q96EF9 292 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 INPP5KQ9BT40 448 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 BEX2Q9BXY8 128 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 ROPN1BQ9BZX4 212 aaPredicted RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 ROPN1Q9HAT0 212 aaPredicted RBP12.19□□□□□ -0.46
VARS-226ENST00000483275 SLC7A10Q9NS82 523 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 WDR45Q9Y484 360 aa12.19□□□□□ -0.46
VARS-226ENST00000483275 TMEM72A0PK05 275 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 PRAMEF27A3QJZ7 478 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms