RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 TGP01266 2768 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 ARFGEF3Q5TH69 2177 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SERINC4A6NH21 518 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 B4DSR2 109 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 NPIPB8E9PQR5 432 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 NPIPB9F8W1W9 429 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 PDE5AO76074 875 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 PMS2P2O95744 297 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 CRYAAP02489 173 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SNRPAP09012 282 aaKnown RBP11.63□□□□□ -0.55
NDC1-202ENST00000480952 IFNGR1P15260 489 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 DDX5P17844 614 aaKnown RBP11.63□□□□□ -0.55
NDC1-202ENST00000480952 PGCP20142 388 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 MPGP29372 298 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SLC1A3P43003 542 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SLC16A1P53985 500 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 TRIP10Q15642 601 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 EFNB3Q15768 340 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 ADIPOQQ15848 244 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 PRR31Q5SQ13 230 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SHQ1Q6PI26 577 aaKnown RBP11.63□□□□□ -0.55
NDC1-202ENST00000480952 ZNF786Q8N393 782 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 CLHC1Q8NHS4 586 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 DCAKDQ8WVC6 231 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 WDR60Q8WVS4 1066 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 RBM4Q9BWF3 364 aaKnown RBP11.63□□□□□ -0.55
NDC1-202ENST00000480952 FUT8Q9BYC5 575 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 ACTRT3Q9BYD9 372 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SAP130Q9H0E3 1048 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 ACER3Q9NUN7 267 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 C1orf109Q9NX04 203 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 BAIAP2L1Q9UHR4 511 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 ZNF180Q9UJW8 692 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 SLC9A8Q9Y2E8 581 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 KCNE3Q9Y6H6 103 aa11.63□□□□□ -0.55
NDC1-202ENST00000480952 HEATR1Q9H583 2144 aaKnown RBP11.63□□□□□ -0.55
NDC1-202ENST00000480952 VSTM5A8MXK1 200 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 KRT16P08779 473 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
NDC1-202ENST00000480952 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
NDC1-202ENST00000480952 OR2B6P58173 313 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 SKP2Q13309 424 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 TP53BP2Q13625 1128 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 PDE7AQ13946 482 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 HIKESHIQ53FT3 197 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 PDZK1Q5T2W1 519 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 TSPO2Q5TGU0 170 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 ZCCHC24Q8N2G6 241 aaKnown RBP11.62□□□□□ -0.55
NDC1-202ENST00000480952 UBASH3BQ8TF42 649 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 ARL5BQ96KC2 179 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 SLC38A2Q96QD8 506 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 CCT7Q99832 543 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 KATNB1Q9BVA0 655 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 SIRT3Q9NTG7 399 aaPredicted RBP11.62□□□□□ -0.55
NDC1-202ENST00000480952 ZDHHC18Q9NUE0 388 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 CHRNA9Q9UGM1 479 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 HDGFL3Q9Y3E1 203 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 CCL27Q9Y4X3 112 aa11.62□□□□□ -0.55
NDC1-202ENST00000480952 H3BQF6 201 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 SLC28A1O00337 649 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 DNPH1O43598 174 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 DNAJA2O60884 412 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 CSTAP01040 98 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 UBTFL6P0CB48 400 aaPredicted RBP11.61□□□□□ -0.55
NDC1-202ENST00000480952 SDC1P18827 310 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 PRPH2P23942 346 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 FKBP2P26885 142 aaKnown RBP11.61□□□□□ -0.55
NDC1-202ENST00000480952 HILS1P60008 231 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 DEFA6Q01524 100 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 SLC7A5Q01650 507 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 RIN1Q13671 783 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 GPR68Q15743 365 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 SPDYE7PQ495Y7 208 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 LCA5Q86VQ0 697 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 SVOPLQ8N434 492 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 ZNF563Q8TA94 476 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 JMJD8Q96S16 334 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 CDC42EP4Q9H3Q1 356 aaKnown RBP11.61□□□□□ -0.55
NDC1-202ENST00000480952 OBP2BQ9NPH6 170 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 CTPS2Q9NRF8 586 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 HIF1ANQ9NWT6 349 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 GRIP1Q9Y3R0 1128 aa11.61□□□□□ -0.55
NDC1-202ENST00000480952 PKD1L1Q8TDX9 2849 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 SH3PXD2BA1X283 911 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 ANKRD28O15084 1053 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
NDC1-202ENST00000480952 KRT33AO76009 404 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 UROSP10746 265 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 CCNA2P20248 432 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 LIMS1P48059 325 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 CLK1P49759 484 aaKnown RBP11.6□□□□□ -0.55
NDC1-202ENST00000480952 UBE2NP61088 152 aaKnown RBP11.6□□□□□ -0.55
NDC1-202ENST00000480952 AWAT1Q58HT5 328 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 USP43Q70EL4 1123 aa11.6□□□□□ -0.55
NDC1-202ENST00000480952 EIF3MQ7L2H7 374 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms