RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 APOBEC1P41238 236 aaKnown RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 YAP1P46937 504 aaKnown RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 CHRNB3Q05901 458 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 RBPJQ06330 500 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 C3AR1Q16581 482 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ELOA3BQ3SY89 546 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 FAM98BQ52LJ0 330 aaKnown RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 SWT1Q5T5J6 900 aaKnown RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 VASNQ6EMK4 673 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ULK3Q6PHR2 472 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 FGD2Q7Z6J4 655 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ATG4DQ86TL0 474 aaPredicted RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 CYP4Z1Q86W10 505 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 UBQLNLQ8IYU4 475 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 OFCC1Q8IZS5 231 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ST6GALNAC3Q8NDV1 305 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ATP6V1C2Q8NEY4 427 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ELOA3Q8NG57 546 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 SLC25A43Q8WUT9 341 aaPredicted RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 DNAJA4Q8WW22 397 aaPredicted RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 MIB2Q96AX9 1013 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ADAM19Q9H013 955 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 SERINC1Q9NRX5 453 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 PRDM4Q9UKN5 801 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 SLC7A7Q9UM01 511 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 AURKCQ9UQB9 309 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 TMED7Q9Y3B3 224 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ZNF337Q9Y3M9 751 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 AP4B1Q9Y6B7 739 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ENPP4Q9Y6X5 453 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 PHF3Q92576 2039 aaKnown RBP13.81□□□□□ -0.2
SEC13-215ENST00000477547 ITPR2Q14571 2701 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 J3KTA2 159 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 BCKDKO14874 412 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 CHP2O43745 196 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 ITGA2P17301 1181 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 PTNP21246 168 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 CXCR1P25024 350 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 IFNA8P32881 189 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 SFTPDP35247 375 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 PTGS2P35354 604 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 STARP49675 285 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 LHX2P50458 406 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 CDH12P55289 794 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 CCNIQ14094 377 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 SYT14P1Q58G82 188 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 CHERPQ8IWX8 916 aaKnown RBP13.81□□□□□ -0.2
SEC13-215ENST00000477547 RELTQ969Z4 430 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 SLC41A3Q96GZ6 507 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 C7orf34Q96L11 122 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 ZNF300Q96RE9 604 aaPredicted RBP13.81□□□□□ -0.2
SEC13-215ENST00000477547 C12orf10Q9HB07 376 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 NDUFAF4Q9P032 175 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 STOML1Q9UBI4 398 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 A4GNTQ9UNA3 340 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 CAMK2AQ9UQM7 478 aa13.81□□□□□ -0.2
SEC13-215ENST00000477547 FAM32AQ9Y421 112 aaKnown RBP13.81□□□□□ -0.2
SEC13-215ENST00000477547 TMEM72A0PK05 275 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 GJE1A6NN92 205 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 ANKRD65E5RJM6 399 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 H0Y3Z8 333 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 DIRAS1O95057 198 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 TPOP07202 933 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 RAP2AP10114 183 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 TFPIP10646 304 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 PNMTP11086 282 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 UMPSP11172 480 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 ZNF708P17019 499 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 SHC1P29353 583 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 SLC7A1P30825 629 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 CLDN18P56856 261 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 CLDN20P56880 219 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 RAC1P63000 192 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 PIN1Q13526 163 aaPredicted RBP13.8□□□□□ -0.2
SEC13-215ENST00000477547 ESPL1Q14674 2120 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 KPNB1Q14974 876 aaKnown RBP13.8□□□□□ -0.2
SEC13-215ENST00000477547 WLSQ5T9L3 541 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 GDF7Q7Z4P5 450 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 TSEN54Q7Z6J9 526 aaKnown RBP13.8□□□□□ -0.2
SEC13-215ENST00000477547 GGNQ86UU5 652 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 CD163Q86VB7 1156 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 ADGRG3Q86Y34 549 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 LILRA2Q8N149 483 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 MEIOBQ8N635 442 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 CANT1Q8WVQ1 401 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 KLHL15Q96M94 604 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 DOCK7Q96N67 2140 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 TIMP4Q99727 224 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 OR11A1Q9GZK7 315 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 IL1RAPQ9NPH3 570 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 RHCGQ9UBD6 479 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 RIMS3Q9UJD0 308 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 ACAD8Q9UKU7 415 aa13.8□□□□□ -0.2
SEC13-215ENST00000477547 PRRC2CQ9Y520 2896 aaKnown RBP13.8□□□□□ -0.2
SEC13-215ENST00000477547 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
SEC13-215ENST00000477547 EIF1AYO14602 144 aaKnown RBP13.79□□□□□ -0.2
SEC13-215ENST00000477547 EFNA2O43921 213 aa13.79□□□□□ -0.2
SEC13-215ENST00000477547 SLC19A2O60779 497 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms