RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 OC90Q02509 493 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-211ENST00000476772 CDK5R2Q13319 367 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 GINS1Q14691 196 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 ZNF227Q86WZ6 799 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 GALNT16Q8N428 558 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 NPAS1Q99742 590 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 HHATLQ9HCP6 504 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 MED17Q9NVC6 651 aa26.19■■□□□ 1.78
VEGFA-211ENST00000476772 MED13Q9UHV7 2174 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 TNFSF12-TNFSF13A0A0A6YY99 330 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 TMED7-TICAM2A0A0A6YYA0 188 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 LRRN3E7EW58 273 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 RRADP55042 308 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 C6orf141Q5SZD1 244 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 BROXQ5VW32 411 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 C12orf73Q69YU5 71 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 DEPDC4Q8N2C3 294 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 CLDN22Q8N7P3 220 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 OR4K17Q8NGC6 315 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 FANK1Q8TC84 345 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 SCNM1Q9BWG6 230 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 TBC1D23Q9NUY8 699 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 IMPAD1Q9NX62 359 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 ZNF226Q9NYT6 803 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 TMED7Q9Y3B3 224 aa26.18■■□□□ 1.78
VEGFA-211ENST00000476772 ANKRD33BA6NCL7 494 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 SMNDC1O75940 238 aaKnown RBP eCLIP26.17■■□□□ 1.782e-18■■□□□ 12.8
VEGFA-211ENST00000476772 GIPRP48546 466 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 ZNF41P51814 821 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-211ENST00000476772 FXYD6P3P58550 94 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 CDK5Q00535 292 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 CLEC12AQ5QGZ9 265 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 ADGRG3Q86Y34 549 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 PLCZ1Q86YW0 608 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 OSTF1Q92882 214 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 SLC25A19Q9HC21 320 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 ABI3Q9P2A4 366 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 SIGLEC7Q9Y286 467 aa26.17■■□□□ 1.78
VEGFA-211ENST00000476772 MPDZO75970 2070 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 TRAV27A0A087WT01 109 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 SUSD5O60279 629 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 P04436 131 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 HTR3AP46098 478 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 FOXF1Q12946 379 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 ACSM5Q6NUN0 579 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 SLC46A3Q7Z3Q1 461 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 PSD4Q8NDX1 1056 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 APH1BQ8WW43 257 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 HDAC2Q92769 488 aaKnown RBP26.16■■□□□ 1.78
VEGFA-211ENST00000476772 SAMD8Q96LT4 415 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 TSSK6Q9BXA6 273 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 OR52D1Q9H346 318 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 IL20RAQ9UHF4 553 aa26.16■■□□□ 1.78
VEGFA-211ENST00000476772 TMEM72A0PK05 275 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 SNPHO15079 494 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 CH25HO95992 272 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 DLX5P56178 289 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 PLPPR5Q32ZL2 321 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 SLC27A4Q6P1M0 643 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 TMEM154Q6P9G4 183 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 LINC00696Q6ZRV3 163 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 OAFQ86UD1 273 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 ADNPQ9H2P0 1102 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 SACM1LQ9NTJ5 587 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 LRFN1Q9P244 771 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 A6NL46 340 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 ETV2O00321 342 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-211ENST00000476772 OR7A10O76100 309 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 IGF2P01344 180 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 FMO3P31513 532 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 CD96P40200 585 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 MASP1P48740 699 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 SMSP52788 366 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 LRRC17Q8N6Y2 441 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 OR51A7Q8NH64 312 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 RHOXF1Q8NHV9 184 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 KTI12Q96EK9 354 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-211ENST00000476772 C1GALT1C1Q96EU7 318 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 PTGES2Q9H7Z7 377 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 SCOCQ9UIL1 159 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 WASF3Q9UPY6 502 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 PCDHGB6Q9Y5F9 930 aa26.15■■□□□ 1.78
VEGFA-211ENST00000476772 A0A0G2JMM0 328 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 A0A1W2PPB8 328 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 A0A1W2PRS3 328 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 KIR3DP1A8MWS1 328 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 SHISA8B8ZZ34 492 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 PTP4A3O75365 173 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 WBP4O75554 376 aaKnown RBP26.14■■□□□ 1.78
VEGFA-211ENST00000476772 SLC25A12O75746 678 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 GABRB1P18505 474 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 CASRP41180 1078 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 CDC20Q12834 499 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 TUBA3CQ13748 450 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 KCTD21Q4G0X4 260 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 TUBA3EQ6PEY2 450 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 CASP12Q6UXS9 341 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 CCDC103Q8IW40 242 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 OR4Q3Q8NH05 313 aa26.14■■□□□ 1.78
VEGFA-211ENST00000476772 TMEM41AQ96HV5 264 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms