RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CCDC168Q8NDH2 2452 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 ANKHD1Q8IWZ3 2542 aaKnown RBP14.14□□□□□ -0.15
CPSF3-203ENST00000475482 NKX2-6A6NCS4 301 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 SAC3D1A6NKF1 404 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 GNB5O14775 395 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 CBR3O75828 277 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 TRAPPC6AO75865 159 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 IL33O95760 270 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 EPPINO95925 133 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 HPGDP15428 266 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 BMP7P18075 431 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 FPR1P21462 350 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 IL12BP29460 328 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 SSTR2P30874 369 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 CEACAM8P31997 349 aaPredicted RBP14.14□□□□□ -0.15
CPSF3-203ENST00000475482 OR1E2P47887 323 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 RFX3P48380 749 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 ATP12AP54707 1039 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 ZNF141Q15928 474 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 SHQ1Q6PI26 577 aaKnown RBP14.14□□□□□ -0.15
CPSF3-203ENST00000475482 IZUMO2Q6UXV1 221 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 RANBP3LQ86VV4 465 aaPredicted RBP14.14□□□□□ -0.15
CPSF3-203ENST00000475482 VRK2Q86Y07 508 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 LIX1LQ8IVB5 337 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 OR4N2Q8NGD1 307 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 DNAJC9Q8WXX5 260 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 SLC35B4Q969S0 331 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 TMCO6Q96DC7 493 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 AMBRA1Q9C0C7 1298 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 OR2B2Q9GZK3 357 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 Q9H521 79 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 PRDM4Q9UKN5 801 aa14.14□□□□□ -0.15
CPSF3-203ENST00000475482 SAMHD1Q9Y3Z3 626 aaKnown RBP14.14□□□□□ -0.15
CPSF3-203ENST00000475482 OTOGQ6ZRI0 2925 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 FAM90A27PA6NNH2 459 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 B4DXG7 233 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 FAM47E-STBD1D6RA91 191 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 H3BNH8 94 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 AP3D1O14617 1153 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 REM1O75628 298 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 TIMP3P35625 211 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 RGS8P57771 180 aaPredicted RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 SPIBQ01892 262 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 EFR3AQ14156 821 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 NRF1Q16656 503 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 ACSF3Q4G176 576 aaPredicted RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 WIPI1Q5MNZ9 446 aaPredicted RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 MEX3BQ6ZN04 569 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 MED12LQ86YW9 2145 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 DMRTC2Q8IXT2 367 aaPredicted RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 PM20D2Q8IYS1 436 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 CBR4Q8N4T8 237 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 PIK3C3Q8NEB9 887 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 FAM83FQ8NEG4 500 aaPredicted RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 WDYHV1Q96HA8 205 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 ADOQ96SZ5 270 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 ARHGDIGQ99819 225 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 RBM4BQ9BQ04 359 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 RBM4Q9BWF3 364 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 POLR2J2Q9GZM3 115 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 QRSL1Q9H0R6 528 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 POLR2J3Q9H1A7 115 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 COQ10BQ9H8M1 238 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 NTN4Q9HB63 628 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 UBQLN4Q9NRR5 601 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 ALKBH4Q9NXW9 302 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 KLRF1Q9NZS2 232 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 SLC6A5Q9Y345 797 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 MRPS18CQ9Y3D5 142 aaKnown RBP14.13□□□□□ -0.15
CPSF3-203ENST00000475482 ORC6Q9Y5N6 252 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 WIF1Q9Y5W5 379 aa14.13□□□□□ -0.15
CPSF3-203ENST00000475482 C2orf72A6NCS6 295 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 KDM4EB2RXH2 506 aaPredicted RBP14.12□□□□□ -0.15
CPSF3-203ENST00000475482 TNFRSF11BO00300 401 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 SCDO00767 359 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 UGT2B17O75795 530 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 ACTL6AO96019 429 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 HPRP00739 348 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 CPN1P15169 458 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 TNFRSF1BP20333 461 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 RRM2P31350 389 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 EEF1A1P68104 462 aaKnown RBP14.12□□□□□ -0.15
CPSF3-203ENST00000475482 EPS8Q12929 822 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 SLC25A35Q3KQZ1 300 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 IQCCQ4KMZ1 466 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 DCST1Q5T197 706 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 NSUN5P2Q63ZY6 315 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 POMZP3Q6PJE2 187 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 DEF8Q6ZN54 512 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 ZNF836Q6ZNA1 936 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 OLIG3Q7RTU3 272 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 STK32CQ86UX6 486 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 PLCZ1Q86YW0 608 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 GRAMD2AQ8IUY3 354 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 ZNF440Q8IYI8 595 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 VANGL1Q8TAA9 524 aaPredicted RBP14.12□□□□□ -0.15
CPSF3-203ENST00000475482 ABTB1Q969K4 478 aaPredicted RBP14.12□□□□□ -0.15
CPSF3-203ENST00000475482 ZG16BQ96DA0 208 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 LURAP1Q96LR2 239 aa14.12□□□□□ -0.15
CPSF3-203ENST00000475482 HHATLQ9HCP6 504 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms