RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 FBXW9Q5XUX1 488 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 GRINAQ7Z429 371 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 ARFGAP2Q8N6H7 521 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 ANKFN1Q8N957 763 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 FAM71CQ8NEG0 241 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 SLC25A43Q8WUT9 341 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-210ENST00000469897 CNOT9Q92600 299 aaKnown RBP11.72□□□□□ -0.53
CPSF4-210ENST00000469897 NEURL3Q96EH8 262 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 PAIP2Q9BPZ3 127 aaKnown RBP11.72□□□□□ -0.53
CPSF4-210ENST00000469897 SLCO5A1Q9H2Y9 848 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 CENPHQ9H3R5 247 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 CHRNA9Q9UGM1 479 aa11.72□□□□□ -0.53
CPSF4-210ENST00000469897 NOSIPQ9Y314 301 aaKnown RBP11.72□□□□□ -0.53
CPSF4-210ENST00000469897 SPIN1Q9Y657 262 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-210ENST00000469897 IGKV3D-15A0A087WSY6 115 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 A0A1W2PR80 420 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 CCDC154A6NI56 674 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 HMGN4O00479 90 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 AP3D1O14617 1153 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 ABCD4O14678 606 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 RAD51DO75771 328 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 GSNP06396 782 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 DHRS4L1P0CG22 281 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 COX5AP20674 150 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 SYPL1Q16563 259 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 ABLIM2Q6H8Q1 611 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 ZNF621Q6ZSS3 439 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 P2RY8Q86VZ1 359 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 RNF130Q86XS8 419 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-210ENST00000469897 OR52N5Q8NH56 324 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 APH1AQ96BI3 265 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 ZHX1-C8orf76Q96EF9 292 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 INPP5KQ9BT40 448 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 TRAF4Q9BUZ4 470 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-210ENST00000469897 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 PARD6BQ9BYG5 372 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 SSU72Q9NP77 194 aaKnown RBP11.71□□□□□ -0.53
CPSF4-210ENST00000469897 EMC3Q9P0I2 261 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
CPSF4-210ENST00000469897 E9PBE3 544 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 TM9SF1O15321 606 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 MRPL33O75394 65 aaKnown RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 CRLF1O75462 422 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 PMS2P2O95744 297 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 FKBP2P26885 142 aaKnown RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 IL12AP29459 219 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 CLK1P49759 484 aaKnown RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 KHKP50053 298 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 ZNF83P51522 516 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 CLNS1AP54105 237 aaKnown RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 FOXG1P55316 489 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 ETFDHQ16134 617 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 MREGQ8N565 214 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 OR52E4Q8NGH9 312 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 OIT3Q8WWZ8 545 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 MUS81Q96NY9 551 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 PANX1Q96RD7 426 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 ALG2Q9H553 416 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 MTHFD2LQ9H903 347 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 MEAF6Q9HAF1 191 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 EXOSC3Q9NQT5 275 aaKnown RBP11.7□□□□□ -0.54
CPSF4-210ENST00000469897 ASB6Q9NWX5 421 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 TMEM181Q9P2C4 612 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 BTNL2Q9UIR0 455 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 HAO1Q9UJM8 370 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 TRAPPC4Q9Y296 219 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 B3GALT5Q9Y2C3 310 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
CPSF4-210ENST00000469897 TMED7-TICAM2A0A0A6YYA0 188 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 TMEM72A0PK05 275 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 AGAP5A6NIR3 686 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 E7EQL1 145 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 GPR171O14626 319 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 SSX4O60224 188 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 SNUPNO95149 360 aaKnown RBP11.69□□□□□ -0.54
CPSF4-210ENST00000469897 THBS1P07996 1170 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 CHRM4P08173 479 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 ALDOCP09972 364 aaKnown RBP11.69□□□□□ -0.54
CPSF4-210ENST00000469897 IMPDH2P12268 514 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 TACR3P29371 465 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 CDKN2CP42773 168 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 MAGEA8P43361 318 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 HTR3AP46098 478 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 CDH11P55287 796 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 HPCAP84074 193 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 H3F3AP84243 136 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 BST1Q10588 318 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 GABRA6Q16445 453 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 DPY19L1Q2PZI1 675 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 COX20Q5RI15 118 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 CEP85LQ5SZL2 805 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 C9orf135Q5VTT2 229 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 SLC22A25Q6T423 547 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 LRRC34Q8IZ02 419 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 PIGXQ8TBF5 258 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 PNPT1Q8TCS8 783 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms