RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RBMS1P29558 406 aaKnown RBP17.28■□□□□ 0.36
SMC4-209ENST00000468653 ST13P50502 369 aaKnown RBP17.28■□□□□ 0.36
SMC4-209ENST00000468653 GAS1P54826 345 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 FXYD6P3P58550 94 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 PMS2P3Q13401 168 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 ZBED5Q49AG3 693 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 POMZP3Q6PJE2 187 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 IL20RBQ6UXL0 311 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 RAB43Q86YS6 212 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 TMEM163Q8TC26 289 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 TNFRSF13CQ96RJ3 184 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 GPR83Q9NYM4 423 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 PPP4R1LQ9P1A2 415 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 OSGIN1Q9UJX0 560 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 EFCAB10A6NFE3 127 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 ANKUB1A6NFN9 424 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 CCDC160A6NGH7 325 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 MAN1A2O60476 641 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 OR7A10O76100 309 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 JUNBP17275 347 aaPredicted RBP17.27■□□□□ 0.35
SMC4-209ENST00000468653 MLLT10P55197 1068 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 SUMO3P55854 103 aaPredicted RBP17.27■□□□□ 0.35
SMC4-209ENST00000468653 MLF1P58340 268 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 EFNB1P98172 346 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 IL10RAQ13651 578 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 MEDAGQ5VYS4 303 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 PRSS48Q7RTY5 328 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 SVOPQ8N4V2 548 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 C10orf53Q8N6V4 93 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 TMEM234Q8WY98 164 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 LRR1Q96L50 414 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 IFT27Q9BW83 186 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 MED11Q9P086 117 aa17.27■□□□□ 0.35
SMC4-209ENST00000468653 SURF4O15260 269 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 MT-ND2P03891 347 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 CEACAM1P13688 526 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 CASP3P42574 277 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 SLC9A3P48764 834 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 POLR2HP52434 150 aaKnown RBP17.26■□□□□ 0.35
SMC4-209ENST00000468653 Q0VFX4 171 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 SLC25A30Q5SVS4 291 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 XAF1Q6GPH4 301 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 RTL4Q6ZR62 310 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 GRINAQ7Z429 371 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 BCDIN3DQ7Z5W3 292 aaKnown RBP17.26■□□□□ 0.35
SMC4-209ENST00000468653 STX19Q8N4C7 294 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 TMEM156Q8N614 296 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 IL22RA1Q8N6P7 574 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 ENKD1Q9H0I2 346 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 MED17Q9NVC6 651 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 FKBP14Q9NWM8 211 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 GPR52Q9Y2T5 361 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 ZNF337Q9Y3M9 751 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 WIF1Q9Y5W5 379 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 MRPS18BQ9Y676 258 aaKnown RBP17.26■□□□□ 0.35
SMC4-209ENST00000468653 AHCTF1Q8WYP5 2266 aa17.26■□□□□ 0.35
SMC4-209ENST00000468653 LRRN3E7EW58 273 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 SLC25A12O75746 678 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 IGF2P01344 180 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 SERPINA7P05543 415 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 CD82P27701 267 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 GRK5P34947 590 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 PTGDSP41222 190 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 NOVA1P51513 510 aaKnown RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 EMX1Q04741 257 aaPredicted RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 RAB39AQ14964 217 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 SYT14P1Q58G82 188 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 THSD4Q6ZMP0 1018 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 DND1Q8IYX4 353 aaKnown RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 LRRC17Q8N6Y2 441 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 NKD1Q969G9 470 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 DGCR14Q96DF8 476 aaKnown RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 ZNF582Q96NG8 517 aaPredicted RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 MCCC2Q9HCC0 563 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 CNOT2Q9NZN8 540 aaKnown RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 RPL36Q9Y3U8 105 aaKnown RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 PCDHGB1Q9Y5G3 927 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 PROB1E7EW31 1015 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 BHLHE40O14503 412 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 FADS2O95864 444 aaKnown RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 CDK1P06493 297 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 STSP08842 583 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 MSX1P28360 303 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 SLC6A6P31641 620 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 TTKP33981 857 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 HTR3AP46098 478 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 ST3GAL4Q11206 333 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 CHAF1BQ13112 559 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 CCDC81Q6ZN84 652 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 SLC46A3Q7Z3Q1 461 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 ARMC10Q8N2F6 343 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 SLC43A2Q8N370 569 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 LNX2Q8N448 690 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 TUBA1CQ9BQE3 449 aa17.25■□□□□ 0.35
SMC4-209ENST00000468653 CHCHD2Q9Y6H1 151 aaPredicted RBP17.25■□□□□ 0.35
SMC4-209ENST00000468653 TMED7-TICAM2A0A0A6YYA0 188 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 SNTNA6NMZ2 147 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 H3BSA7 217 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 NDUFB2O95178 105 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 PCMT1P22061 227 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms