RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 NATD1Q8N6N6 113 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 MNS1Q8NEH6 495 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 MOAP1Q96BY2 351 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 MSI2Q96DH6 328 aaKnown RBP11.46□□□□□ -0.57
PTPN7-207ENST00000468385 DNAJA3Q96EY1 480 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 ARL5BQ96KC2 179 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 C16orf45Q96MC5 204 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-207ENST00000468385 TRMOQ9BU70 441 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 CCDC106Q9BWC9 280 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 CHODLQ9H9P2 273 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 CTPS2Q9NRF8 586 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 ATAD3AQ9NVI7 634 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 KCNS2Q9ULS6 477 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 PMF1-BGLAPU3KQ54 211 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 MALRD1Q5VYJ5 2156 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 COPEO14579 308 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 GPR171O14626 319 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 TRIM13O60858 407 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PEX11AO75192 247 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 BCAS1O75363 584 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 MRPL33O75394 65 aaKnown RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 LYPLA1O75608 230 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PMS2P2O95744 297 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 TFPIP10646 304 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 BMP4P12644 408 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 MATN1P21941 496 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 MAPK1P28482 360 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PGM1P36871 562 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 APOBEC1P41238 236 aaKnown RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 HBA1P69905 142 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PHC1P78364 1004 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 GGTLC2Q14390 218 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 MAPK14Q16539 360 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 SWI5Q1ZZU3 235 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 MST1LQ2TV78 715 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 XKR7Q5GH72 579 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 LSRQ86X29 649 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 CCDC103Q8IW40 242 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 FAM71CQ8NEG0 241 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PIGXQ8TBF5 258 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 ZHX1-C8orf76Q96EF9 292 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PPP3R2Q96LZ3 170 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 C1orf50Q9BV19 199 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 BHLHE41Q9C0J9 482 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 ZNF350Q9GZX5 532 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 SLC17A5Q9NRA2 495 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 CHRNA9Q9UGM1 479 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 MKLN1Q9UL63 735 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 HDGFL3Q9Y3E1 203 aa11.45□□□□□ -0.58
PTPN7-207ENST00000468385 SPIN1Q9Y657 262 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-207ENST00000468385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.582e-6■■□□□ 13
PTPN7-207ENST00000468385 NUP214P35658 2090 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-207ENST00000468385 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 LOC100289279A0A1B0GTE1 492 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 ATP6V1G2-DDX39BF2Z307 99 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 CFLARO15519 480 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 DNPH1O43598 174 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 STX11O75558 287 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 AK1P00568 194 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 SHBGP04278 402 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 SOAT1P35610 550 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 NR4A2P43354 598 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 PDLIM4P50479 330 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 H3F3AP84243 136 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 ARHGAP11BQ3KRB8 267 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 C9orf135Q5VTT2 229 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 IL23RQ5VWK5 629 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 EIF3MQ7L2H7 374 aaKnown RBP11.44□□□□□ -0.58
PTPN7-207ENST00000468385 C6orf120Q7Z4R8 191 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 RIMKLAQ8IXN7 391 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 IFT20Q8IY31 132 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 CLEC4FQ8N1N0 589 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-207ENST00000468385 C3orf30Q96M34 536 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 SORCS2Q96PQ0 1159 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 DUSP26Q9BV47 211 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 OR11A1Q9GZK7 315 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 FKRPQ9H9S5 495 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 EML4Q9HC35 981 aaKnown RBP11.44□□□□□ -0.58
PTPN7-207ENST00000468385 MID2Q9UJV3 735 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 DCTN4Q9UJW0 460 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 AMDHD2Q9Y303 409 aa11.44□□□□□ -0.58
PTPN7-207ENST00000468385 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 NDUFS8O00217 210 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 ANKRD28O15084 1053 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 NPHS1O60500 1241 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 APEHP13798 732 aaKnown RBP11.43□□□□□ -0.58
PTPN7-207ENST00000468385 KRT4P19013 534 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 MAGEA8P43361 318 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 PLAURQ03405 335 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 C6orf136Q5SQH8 315 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 TSPO2Q5TGU0 170 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 TYW3Q6IPR3 259 aaKnown RBP11.43□□□□□ -0.58
PTPN7-207ENST00000468385 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 CASP12Q6UXS9 341 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 GRINAQ7Z429 371 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms