RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CNOT9Q92600 299 aaKnown RBP21.62■■□□□ 1.05
PTCH1-210ENST00000468211 USB1Q9BQ65 265 aaKnown RBP21.62■■□□□ 1.05
PTCH1-210ENST00000468211 INPP5KQ9BT40 448 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 PARD6BQ9BYG5 372 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 LIPT1Q9Y234 373 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 SONP18583 2426 aaKnown RBP21.62■■□□□ 1.05
PTCH1-210ENST00000468211 KIAA1324LA8MWY0 1029 aaPredicted RBP21.61■■□□□ 1.05
PTCH1-210ENST00000468211 SHISA9B4DS77 424 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 AP3D1O14617 1153 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 CCNA2P20248 432 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 IL12AP29459 219 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 S100A3P33764 101 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 CDKN2CP42773 168 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 KCNJ10P78508 379 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 BST1Q10588 318 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 FAPQ12884 760 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 SYPL1Q16563 259 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 CLEC12BQ2HXU8 276 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 RNF130Q86XS8 419 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 ZNF433Q8N7K0 673 aaPredicted RBP21.61■■□□□ 1.05
PTCH1-210ENST00000468211 CCDC115Q96NT0 180 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 CENPHQ9H3R5 247 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 KCNK9Q9NPC2 374 aa21.61■■□□□ 1.05
PTCH1-210ENST00000468211 ALPK2Q86TB3 2170 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 SDHDO14521 159 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 NDUFS7O75251 213 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 PGM3O95394 542 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 CD8AP01732 235 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 CLNS1AP54105 237 aaKnown RBP21.6■■□□□ 1.05
PTCH1-210ENST00000468211 DPY19L1Q2PZI1 675 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 OGFOD2Q6N063 350 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 DNAJC14Q6Y2X3 702 aaPredicted RBP21.6■■□□□ 1.05
PTCH1-210ENST00000468211 GRINAQ7Z429 371 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 CCDC103Q8IW40 242 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 OIT3Q8WWZ8 545 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 SLC38A1Q9H2H9 487 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 EXOSC3Q9NQT5 275 aaKnown RBP21.6■■□□□ 1.05
PTCH1-210ENST00000468211 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.6■■□□□ 1.05
PTCH1-210ENST00000468211 BTNL2Q9UIR0 455 aa21.6■■□□□ 1.05
PTCH1-210ENST00000468211 ANK3Q12955 4377 aaKnown RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 A0A1W2PP18 115 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 RNF223E7ERA6 249 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 SNUPNO95149 360 aaKnown RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 PMS2P2O95744 297 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 THBS1P07996 1170 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 CHRM4P08173 479 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 GGT1P19440 569 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 PTNP21246 168 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 IDH2P48735 452 aaKnown RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 FOXG1P55316 489 aaPredicted RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 VEZF1Q14119 521 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 PDK3Q15120 406 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 TIMM23BQ5SRD1 257 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 CEP85LQ5SZL2 805 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 FBXW9Q5XUX1 488 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 LRRC34Q8IZ02 419 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 ARFGAP2Q8N6H7 521 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 GTPBP3Q969Y2 492 aaKnown RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 AIG1Q9NVV5 245 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 NOSIPQ9Y314 301 aaKnown RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 SPIN1Q9Y657 262 aaPredicted RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 ABCA1O95477 2261 aa21.59■■□□□ 1.05
PTCH1-210ENST00000468211 HEATR1Q9H583 2144 aaKnown RBP21.59■■□□□ 1.05
PTCH1-210ENST00000468211 CHD3Q12873 2000 aaKnown RBP21.58■■□□□ 1.05
PTCH1-210ENST00000468211 CCDC154A6NI56 674 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 OR5H1A6NKK0 313 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 RAD51DO75771 328 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 IGHV4-39P01824 125 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 GSNP06396 782 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 ACVR1BP36896 505 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 COX20Q5RI15 118 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 MUCL1Q96DR8 90 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 TRMT61AQ96FX7 289 aaKnown RBP21.58■■□□□ 1.05
PTCH1-210ENST00000468211 PAIP2Q9BPZ3 127 aaKnown RBP21.58■■□□□ 1.05
PTCH1-210ENST00000468211 TRAF4Q9BUZ4 470 aaPredicted RBP21.58■■□□□ 1.05
PTCH1-210ENST00000468211 CISD1Q9NZ45 108 aaKnown RBP21.58■■□□□ 1.05
PTCH1-210ENST00000468211 EMC3Q9P0I2 261 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 ADAM21Q9UKJ8 722 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 HDGFL3Q9Y3E1 203 aa21.58■■□□□ 1.05
PTCH1-210ENST00000468211 AGAP5A6NIR3 686 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 ABCD4O14678 606 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 OR2B6P58173 313 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 UBE2J2Q8N2K1 259 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 PNPT1Q8TCS8 783 aaKnown RBP21.57■■□□□ 1.04
PTCH1-210ENST00000468211 APH1AQ96BI3 265 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 TRNT1Q96Q11 434 aaKnown RBP21.57■■□□□ 1.04
PTCH1-210ENST00000468211 PANX1Q96RD7 426 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 SLCO5A1Q9H2Y9 848 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 WDR55Q9H6Y2 383 aaPredicted RBP21.57■■□□□ 1.04
PTCH1-210ENST00000468211 GDF2Q9UK05 429 aaPredicted RBP21.57■■□□□ 1.04
PTCH1-210ENST00000468211 GPR45Q9Y5Y3 372 aa21.57■■□□□ 1.04
PTCH1-210ENST00000468211 TMED7-TICAM2A0A0A6YYA0 188 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 GOLGA8QA0A0J9YX86 632 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 A0A1W2PR80 420 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 TMEM72A0PK05 275 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 GOLGA8OA6NCC3 632 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 GOLGA8NF8WBI6 632 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 IMPDH2P12268 514 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 EPHA3P29320 983 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 SLC16A1P53985 500 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms