RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 CLOCKO15516 846 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 GADD45GO95257 159 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 LDLRP01130 860 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 IGHG3P01860 377 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 CHMP24386 653 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 CXCR1P25024 350 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 DGCR6Q14129 220 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 ATP6AP1Q15904 470 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 ELOA3BQ3SY89 546 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 LINC00114Q6XXX2 140 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 ADGRG3Q86Y34 549 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 ELOA3Q8NG57 546 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 OR5M1Q8NGP8 315 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 RNF217Q8TC41 542 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 SFXN2Q96NB2 322 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 PRSS27Q9BQR3 290 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 DEFB127Q9H1M4 99 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 REEP1Q9H902 201 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 SERINC1Q9NRX5 453 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 AGPAT4Q9NRZ5 378 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 VNN3Q9NY84 501 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 CHRNA9Q9UGM1 479 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 LIPGQ9Y5X9 500 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 COL12A1Q99715 3063 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 MPDZO75970 2070 aa11.98□□□□□ -0.49
PDCD11-202ENST00000466959 BOD1L1Q8NFC6 3051 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 TRGV5A0A0B4J1U4 118 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 GNGT2O14610 69 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 EFNA2O43921 213 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 SUSD5O60279 629 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 HCN1O60741 890 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 FUT4P22083 530 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 GCKP35557 465 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 RBM34P42696 430 aaKnown RBP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 MAP2K6P52564 334 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 HMGA2P52926 109 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 GFRA1P56159 465 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 GK3PQ14409 553 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 RCN1Q15293 331 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 FGD3Q5JSP0 725 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 ZNF324BQ6AW86 544 aaPredicted RBP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 C3orf33Q6P1S2 294 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 POMZP3Q6PJE2 187 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 WDR88Q6ZMY6 472 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 TRILQ7L0X0 811 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 NKAIN4Q8IVV8 208 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 CISD2Q8N5K1 135 aaKnown RBP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 NEIL3Q8TAT5 605 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 SLC25A43Q8WUT9 341 aaPredicted RBP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 LRTOMTQ8WZ04 291 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 HS6ST2Q96MM7 605 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 FUZQ9BT04 418 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 TMEM43Q9BTV4 400 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 ZNF426Q9BUY5 554 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 TSPAN10Q9H1Z9 355 aaPredicted RBP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 LDAHQ9H6V9 325 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 SLC6A5Q9Y345 797 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 LYVE1Q9Y5Y7 322 aa11.97□□□□□ -0.49
PDCD11-202ENST00000466959 SPIN1Q9Y657 262 aaPredicted RBP11.97□□□□□ -0.49
PDCD11-202ENST00000466959 A0A1B0GVC2 190 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 TMEM72A0PK05 275 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 NPIPA5E9PKD4 350 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 TNFRSF11BO00300 401 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 ZNF208O43345 1280 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 ACTL6AO96019 429 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 CCNA2P20248 432 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 IL11P20809 199 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 FKBP2P26885 142 aaKnown RBP11.96□□□□□ -0.49
PDCD11-202ENST00000466959 LIMS1P48059 325 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 RAC1P63000 192 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 NHSL2Q5HYW2 709 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 HMBOX1Q6NT76 420 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 PODNL1Q6PEZ8 512 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 TTC33Q6PID6 262 aaPredicted RBP11.96□□□□□ -0.49
PDCD11-202ENST00000466959 AMIGO2Q86SJ2 522 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 LILRA2Q8N149 483 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 PQLC1Q8N2U9 271 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 OR4C15Q8NGM1 316 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 OR52J3Q8NH60 311 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 SLC7A13Q8TCU3 470 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 STK35Q8TDR2 534 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 TMEM255BQ8WV15 326 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 TMEM239Q8WW34 195 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 ACOT11Q8WXI4 607 aaPredicted RBP11.96□□□□□ -0.49
PDCD11-202ENST00000466959 CENPNQ96H22 339 aaPredicted RBP11.96□□□□□ -0.49
PDCD11-202ENST00000466959 EPYCQ99645 322 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 PKP2Q99959 881 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 BDH2Q9BUT1 245 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 EXO5Q9H790 373 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 DCLRE1BQ9H816 532 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 STOML1Q9UBI4 398 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 NPIPA1Q9UND3 350 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 ZNF337Q9Y3M9 751 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 SAMHD1Q9Y3Z3 626 aaKnown RBP11.96□□□□□ -0.49
PDCD11-202ENST00000466959 AP4B1Q9Y6B7 739 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms