RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PRAMEF27A3QJZ7 478 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 CLDN24A6NM45 220 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 ZNF716A6NP11 495 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 KIAA1324LA8MWY0 1029 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-206ENST00000466532 E9PBE3 544 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 PGM3O95394 542 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 PMS2P2O95744 297 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 IGHV3-9P01782 118 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 DHRS4L1P0CG22 281 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 S100A3P33764 101 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 KCNJ10P78508 379 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 CHRNEQ04844 493 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 PDK3Q15120 406 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 FBXW9Q5XUX1 488 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 SSX8Q7RTT4 187 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 P2RY8Q86VZ1 359 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 LRRC34Q8IZ02 419 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 KIRREL3Q8IZU9 778 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 ARFGAP2Q8N6H7 521 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 ZNF433Q8N7K0 673 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-206ENST00000466532 MAPK1IP1LQ8NDC0 245 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 APH1AQ96BI3 265 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 ARL5BQ96KC2 179 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 ALG2Q9H553 416 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 EXOSC3Q9NQT5 275 aaKnown RBP16.91■□□□□ 0.3
COL9A3-206ENST00000466532 HAO1Q9UJM8 370 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 HDGFL3Q9Y3E1 203 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 PLCE1Q9P212 2302 aa16.91■□□□□ 0.3
COL9A3-206ENST00000466532 OR5H1A6NKK0 313 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 SHISA9B4DS77 424 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 ABCD4O14678 606 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 DNPH1O43598 174 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 RAD51DO75771 328 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 C1QCP02747 245 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 CCNA2P20248 432 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 FKBP2P26885 142 aaKnown RBP16.9■□□□□ 0.3
COL9A3-206ENST00000466532 ACVR1BP36896 505 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 CDH11P55287 796 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 NME5P56597 212 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 PLAURQ03405 335 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 KRTAP1-1Q07627 177 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 STX3Q13277 289 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 RNF130Q86XS8 419 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 ADGRG3Q86Y34 549 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 PIGXQ8TBF5 258 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 CCDC115Q96NT0 180 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 TRAF4Q9BUZ4 470 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-206ENST00000466532 OR11A1Q9GZK7 315 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 SLCO5A1Q9H2Y9 848 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 CENPHQ9H3R5 247 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 MEAF6Q9HAF1 191 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 FAIMQ9NVQ4 179 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 PNPOQ9NVS9 261 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 BTNL2Q9UIR0 455 aa16.9■□□□□ 0.3
COL9A3-206ENST00000466532 YLPM1P49750 1951 aaKnown RBP16.89■□□□□ 0.3
COL9A3-206ENST00000466532 ANK3Q12955 4377 aaKnown RBP16.89■□□□□ 0.29
COL9A3-206ENST00000466532 CIB4A0PJX0 185 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 HMGN4O00479 90 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 GPR171O14626 319 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 ADAM11O75078 769 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 IGHV4-39P01824 125 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 IDH2P48735 452 aaKnown RBP16.89■□□□□ 0.29
COL9A3-206ENST00000466532 CLK1P49759 484 aaKnown RBP16.89■□□□□ 0.29
COL9A3-206ENST00000466532 OR2B6P58173 313 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 SYPL1Q16563 259 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 CCDC103Q8IW40 242 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 OR52N5Q8NH56 324 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 CNOT9Q92600 299 aaKnown RBP16.89■□□□□ 0.29
COL9A3-206ENST00000466532 TEX37Q96LM6 180 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 PANX1Q96RD7 426 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 REG4Q9BYZ8 158 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 ABCA1O95477 2261 aa16.89■□□□□ 0.29
COL9A3-206ENST00000466532 CCDC154A6NI56 674 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 AP3D1O14617 1153 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 NDUFS7O75251 213 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 MRPL33O75394 65 aaKnown RBP16.88■□□□□ 0.29
COL9A3-206ENST00000466532 CD8AP01732 235 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
COL9A3-206ENST00000466532 MAGEA8P43361 318 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 HTR3AP46098 478 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 UFM1P61960 85 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 DMTNQ08495 405 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 MPP2Q14168 576 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 OGFOD2Q6N063 350 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 DTX2Q86UW9 622 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-206ENST00000466532 TRIML2Q8N7C3 387 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 ANKFN1Q8N957 763 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 HS6ST2Q96MM7 605 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 TRNT1Q96Q11 434 aaKnown RBP16.88■□□□□ 0.29
COL9A3-206ENST00000466532 PAIP2Q9BPZ3 127 aaKnown RBP16.88■□□□□ 0.29
COL9A3-206ENST00000466532 SLC38A1Q9H2H9 487 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 AIG1Q9NVV5 245 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 ASB6Q9NWX5 421 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 TMEM181Q9P2C4 612 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 GDF2Q9UK05 429 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-206ENST00000466532 ADAM21Q9UKJ8 722 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms