RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 DEF8Q6ZN54 512 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 CCDC190Q86UF4 302 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 OR5M3Q8NGP4 307 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 ELP5Q8TE02 316 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 HPS1Q92902 700 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 FUZQ9BT04 418 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 MND1Q9BWT6 205 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 PINK1Q9BXM7 581 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 SEC14L4Q9UDX3 406 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 SPTBN2O15020 2390 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 C21orf140B9A014 251 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 NPIPB9F8W1W9 429 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 M0R129 80 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 OR10H3O60404 316 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 ENTPD6O75354 484 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 IL33O95760 270 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 GKN3PP0CG01 181 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 PRG2P13727 222 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 NDUFAF6Q330K2 333 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 SLC25A30Q5SVS4 291 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 MRPL2Q5T653 305 aaKnown RBP17.05■□□□□ 0.32
CAPN3-209ENST00000466222 NDUFAF7Q7L592 441 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 VASH2Q86V25 355 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 GATSQ8NAP1 163 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 DIO2Q92813 273 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 OMA1Q96E52 524 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 OPALINQ96PE5 141 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 G6PC3Q9BUM1 346 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 GPR87Q9BY21 358 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 RTN4RQ9BZR6 473 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 NUAK2Q9H093 628 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 POLR2J3Q9H1A7 115 aaKnown RBP17.05■□□□□ 0.32
CAPN3-209ENST00000466222 FBXL4Q9UKA2 621 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 KLK13Q9UKR3 277 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 TRAPPC4Q9Y296 219 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 LSM2Q9Y333 95 aaKnown RBP17.05■□□□□ 0.32
CAPN3-209ENST00000466222 PCDHGB6Q9Y5F9 930 aa17.05■□□□□ 0.32
CAPN3-209ENST00000466222 ADAM11O75078 769 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 CD63P08962 238 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 NID1P14543 1247 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 PRKAR1BP31321 381 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 DCAF7P61962 342 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 PLCXD2Q0VAA5 305 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 PIN1Q13526 163 aaPredicted RBP17.04■□□□□ 0.32
CAPN3-209ENST00000466222 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.04■□□□□ 0.32
CAPN3-209ENST00000466222 ATP1A1-AS1Q5TC04 95 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 PGBD2Q6P3X8 592 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 CYP4Z2PQ8N1L4 340 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 OR9Q1Q8NGQ5 310 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 NR4A3Q92570 626 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 B3GNT4Q9C0J1 378 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 POLE4Q9NR33 117 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 P4HTMQ9NXG6 502 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 A0A1W2PRQ8 180 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 TRABD2BA6NFA1 517 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 TO15178 435 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 ICOSLGO75144 302 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 OR2J2O76002 312 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 ZFAND5O76080 213 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 SOX30O94993 753 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 APOA1P02647 267 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 DBIP07108 87 aaKnown RBP17.04■□□□□ 0.32
CAPN3-209ENST00000466222 FOXC1Q12948 553 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 LARS2Q15031 903 aaKnown RBP17.04■□□□□ 0.32
CAPN3-209ENST00000466222 SEC23BQ15437 767 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 SSX1Q16384 188 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 PROKR2Q8NFJ6 384 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 CNOT9Q92600 299 aaKnown RBP17.04■□□□□ 0.32
CAPN3-209ENST00000466222 DEFB126Q9BYW3 111 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 POLE3Q9NRF9 147 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 TAS2R16Q9NYV7 291 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 MYOTQ9UBF9 498 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 ZNF232Q9UNY5 417 aa17.04■□□□□ 0.32
CAPN3-209ENST00000466222 IRGMA1A4Y4 181 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 TTC36A6NLP5 189 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.03■□□□□ 0.32
CAPN3-209ENST00000466222 TSPAN2O60636 221 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 UTS2O95399 124 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 ATP12AP54707 1039 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 COPZ1P61923 177 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 C1DQ13901 141 aaKnown RBP17.03■□□□□ 0.32
CAPN3-209ENST00000466222 CD226Q15762 336 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 MRGPREQ86SM8 312 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 NUBPLQ8TB37 319 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 CEP19Q96LK0 163 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 POLDIP3Q9BY77 421 aaKnown RBP17.03■□□□□ 0.32
CAPN3-209ENST00000466222 HHATLQ9HCP6 504 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 SLC9A8Q9Y2E8 581 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 CCDC88CQ9P219 2028 aa17.03■□□□□ 0.32
CAPN3-209ENST00000466222 CDHR4A6H8M9 788 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 H3BN98 237 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 NTN1O95631 604 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 THBS1P07996 1170 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 LIFP15018 202 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 PSMA1P25786 263 aaKnown RBP17.02■□□□□ 0.32
CAPN3-209ENST00000466222 FBXW4P57775 412 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 MLLT11Q13015 90 aaPredicted RBP17.02■□□□□ 0.32
CAPN3-209ENST00000466222 SPHARQ15513 63 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 ZNF141Q15928 474 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 FAM26EQ8N5C1 309 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms