RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 BEND3Q5T5X7 828 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 GPRC6AQ5T6X5 926 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 ATAD3BQ5T9A4 648 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 TMEM225Q6GV28 225 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 GDPD3Q7L5L3 318 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF589Q86UQ0 364 aaPredicted RBP1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 TGIF2LYQ8IUE0 185 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 VSTM4Q8IW00 320 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 PRR22Q8IZ63 422 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 TMEM123Q8N131 208 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 C6orf223Q8N319 242 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 ZCCHC7Q8N3Z6 543 aaKnown RBP1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 STXBP6Q8NFX7 210 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 OR2AP1Q8NGE2 309 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 OR9A1PQ8NGU1 263 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 CTNNBL1Q8WYA6 563 aaPredicted RBP1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 EFHD2Q96C19 240 aaPredicted RBP1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 CYYR1Q96J86 154 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 PGLYRP4Q96LB8 373 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 IMMP1LQ96LU5 166 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 MAGEB18Q96M61 343 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 PSKH2Q96QS6 385 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 CNPY3Q9BT09 278 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 EDEM2Q9BV94 578 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 MAGT1Q9H0U3 335 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 C20orf85Q9H1P6 137 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 LRRN3Q9H3W5 708 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 RAB18Q9NP72 206 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 SMPD3Q9NY59 655 aaPredicted RBP1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 LCMT1Q9UIC8 334 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 KIF25Q9UIL4 384 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 PHF11Q9UIL8 331 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 UGT2A1Q9Y4X1 527 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 NEUROG3Q9Y4Z2 214 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 SH3TC1Q8TE82 1336 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 CLSPNQ9HAW4 1339 aa1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF646O15015 1829 aaPredicted RBP1.29□□□□□ -2.2
NUCKS1-202ENST00000464938 CROCCQ5TZA2 2017 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 IGHV1OR21-1A0A087WYE8 117 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 WI2-2373I1.2A0A1W2PRP0 233 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 METTL21EPA6NDL7 271 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 VSTM2BA6NLU5 285 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 IDSB3KWA1 339 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TRDCB7Z8K6 153 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 F5H6K3 240 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 H0YCG3 227 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 DCTN6O00399 190 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF264O43296 627 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 EMC8O43402 210 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF861PO60384 105 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 OR10H3O60404 316 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF780AO75290 641 aaPredicted RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 MMP23AO75900 390 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 BBOX1O75936 387 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 SNAPINO95295 136 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 LGALS2P05162 132 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 UGT2B4P06133 528 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF853P0CG23 659 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 PRG2P13727 222 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 CALB2P22676 271 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 GLRA2P23416 452 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 HOXD10P28358 340 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 YWHABP31946 246 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 OPRD1P41143 372 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 LEPP41159 167 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 KIR2DS4P43632 304 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 KLRC3Q07444 240 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 SLC10A7Q0GE19 358 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 DAZ2Q13117 558 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 RIPK1Q13546 671 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ARL6IP1Q15041 203 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 DPYSL2Q16555 572 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TPD52L1Q16890 204 aaPredicted RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 EXOC3L2Q2M3D2 409 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 NSUN5P1Q3KNT7 163 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 CARD16Q5EG05 197 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 OR2G6Q5TZ20 316 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TPGS2Q68CL5 300 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ATL3Q6DD88 541 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 OR4F3Q6IEY1 312 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TMEM179BQ7Z7N9 219 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TMEM110Q86TL2 294 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TRIM69Q86WT6 500 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 VRK2Q86Y07 508 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ERI1Q8IV48 349 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TBC1D21Q8IYX1 336 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 LRRC75A-AS1Q8N1F1 130 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TMEM252Q8N6L7 170 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 LINC01555Q8NAE3 123 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 OR52I1Q8NGK6 324 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 BRSK1Q8TDC3 778 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 SETD7Q8WTS6 366 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 RNF138Q8WVD3 245 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 HTR3CQ8WXA8 447 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 UBE2E3Q969T4 207 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 MS4A14Q96JA4 679 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TTC25Q96NG3 672 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 OXGR1Q96P68 337 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 MTMR9Q96QG7 549 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 KCNA7Q96RP8 456 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms