RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ELAVL3Q14576 367 aaKnown RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 TRIM16LQ309B1 348 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 SLC25A52Q3SY17 297 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 RNF212Q495C1 297 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 C9orf129Q5T035 196 aaKnown RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 CCDC137Q6PK04 289 aaKnown RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 Q6ZPB1 254 aaPredicted RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 TMEM179BQ7Z7N9 219 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 ZNF100Q8IYN0 542 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 PRR22Q8IZ63 422 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 SLC38A6Q8IZM9 456 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 KIR3DL3Q8N743 410 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 OR52M1Q8NGK5 317 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 OR4D5Q8NGN0 318 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 ERMNQ8TAM6 284 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 FBXO30Q8TB52 745 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 EMG1Q92979 244 aaKnown RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 PELI1Q96FA3 418 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 IL4I1Q96RQ9 567 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 NIPSNAP3BQ9BS92 247 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 NICN1Q9BSH3 213 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 YTHDF1Q9BYJ9 559 aaKnown RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 SRXN1Q9BYN0 137 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 NMUR2Q9GZQ4 415 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 VCX3BQ9H321 246 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 SIGLEC8Q9NYZ4 499 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 CTNNA3Q9UI47 895 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 PHF11Q9UIL8 331 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 ANGPTL2Q9UKU9 493 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 UBQLN1Q9UMX0 589 aaKnown RBP2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 N6AMT1Q9Y5N5 214 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 SLCO1B1Q9Y6L6 691 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 KIF25-AS1Q9Y6Z4 181 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 NISCHQ9Y2I1 1504 aa2.66□□□□□ -1.98
HMGXB4-205ENST00000464480 BRD4O60885 1362 aaPredicted RBP2.65□□□□□ -1.98
HMGXB4-205ENST00000464480 KDRP35968 1356 aa2.65□□□□□ -1.98
HMGXB4-205ENST00000464480 LRP5LA4QPB2 252 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 METTL21EPA6NDL7 271 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 KLLNB2CW77 178 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 F5H6K3 240 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 ARPC3O15145 178 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 CXCL13O43927 109 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 ECI2O75521 394 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 SPAG6O75602 509 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 LYPD3O95274 346 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF24P17028 368 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 MMP11P24347 488 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 ANXA13P27216 316 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 DAP3P51398 398 aaKnown RBP2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 ZNF45Q02386 682 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 KLRC3Q07444 240 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 EXOC3L2Q2M3D2 409 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 TP53I3Q53FA7 332 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 EOGTQ5NDL2 527 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 SPATA46Q5T0L3 261 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 TPGS2Q68CL5 300 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 ATL3Q6DD88 541 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 WDR74Q6RFH5 385 aaPredicted RBP2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 RUFY3Q7L099 469 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 SLC35F2Q8IXU6 374 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 TBC1D21Q8IYX1 336 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 SVOPLQ8N434 492 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 BBS1Q8NFJ9 593 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 OR4D9Q8NGE8 314 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 SUN5Q8TC36 379 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 MAIP1Q8WWC4 291 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 LRRC45Q96CN5 670 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 TEX13BQ9BXU2 312 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 GORASP2Q9H8Y8 452 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 APMAPQ9HDC9 416 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 RAB18Q9NP72 206 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 IL20Q9NYY1 176 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 IL36GQ9NZH8 169 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 CHMP5Q9NZZ3 219 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 COPS3Q9UNS2 423 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 TRAF3IP3Q9Y228 551 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 EVC2Q86UK5 1308 aa2.65□□□□□ -1.99
HMGXB4-205ENST00000464480 NOTCH3Q9UM47 2321 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 TUBAL3A6NHL2 446 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 TRDCB7Z8K6 153 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 PRRG1O14668 218 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 POLR2DO15514 142 aaKnown RBP2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 OR10H3O60404 316 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 NEMFO60524 1076 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 STAMBPO95630 424 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 LGALS2P05162 132 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 CCDC130P13994 396 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 BLVRAP53004 296 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 ARFIP1P53367 373 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 HSPA2P54652 639 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 STX17P56962 302 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 LYZP61626 148 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 EGFEM1PQ0D2K5 195 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 IL24Q13007 206 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 RIPK1Q13546 671 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 ARL6IP1Q15041 203 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 RCN1Q15293 331 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
HMGXB4-205ENST00000464480 PMF1Q6P1K2 205 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms