RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 NPIPA8P0DM63 369 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 MTHFD2P13995 350 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 IGHV1-2P23083 117 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 CD40P25942 277 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ELK4P28324 431 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 NTSP30990 170 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 GABRA3P34903 492 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 EIF1P41567 113 aaKnown RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 OR3A2P47893 321 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 NCBP2P52298 156 aaKnown RBP eCLIP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 PHC1P78364 1004 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 DEFA6Q01524 100 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 RASGEF1BQ0VAM2 473 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 GALNT1Q10472 559 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 DBPQ10586 325 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 FOXF1Q12946 379 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 DLG1Q12959 904 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 VPS26BQ4G0F5 336 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ARL13AQ5H913 290 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ZMAT1Q5H9K5 638 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 GRTP1Q5TC63 336 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 METTL2BQ6P1Q9 378 aaKnown RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 KLHL24Q6TFL4 600 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 UGT2A3Q6UWM9 527 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 B3GLCTQ6Y288 498 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 CCDC91Q7Z6B0 441 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 TRABD2AQ86V40 505 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 LDLRAD3Q86YD5 345 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 TMCO5AQ8N6Q1 288 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 OR4F6Q8NGB9 312 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 B4GALNT2Q8NHY0 566 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 RHEBL1Q8TAI7 183 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ACTRT1Q8TDG2 376 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ZFP90Q8TF47 636 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ZFAND2BQ8WV99 257 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 PHF21BQ96EK2 531 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 FOXN4Q96NZ1 517 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 SNX18Q96RF0 628 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 OSBPL9Q96SU4 736 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 KCNS3Q9BQ31 491 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 C1QTNF6Q9BXI9 259 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 SRXN1Q9BYN0 137 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 SHCBP1LQ9BZQ2 653 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 BPESC1Q9GZL8 116 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 BRF2Q9HAW0 419 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 SLC35C2Q9NQQ7 365 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 FARSBQ9NSD9 589 aaKnown RBP4.41□□□□□ -1.7
BRCA1-206ENST00000461574 EMC3Q9P0I2 261 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 VPS29Q9UBQ0 182 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 MCM8Q9UJA3 840 aa4.41□□□□□ -1.7
BRCA1-206ENST00000461574 ARFGEF3Q5TH69 2177 aa4.4□□□□□ -1.7
BRCA1-206ENST00000461574 A0A087WV62 115 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 A0A096LPK6 155 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 GXYLT2A0PJZ3 443 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CCDC189A1A4V9 331 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 FAM159BA6NKW6 160 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ALG1L2C9J202 215 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 C9JVG2 144 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 E7ESA3 106 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 KIF2AO00139 706 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 SMAD9O15198 467 aaKnown RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 RGS14O43566 566 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 OXSR1O95747 527 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 OTCP00480 354 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 KRT6AP02538 564 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 KRT6BP04259 564 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 COX5AP20674 150 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ENPP1P22413 925 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 IVDP26440 423 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 SHC1P29353 583 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 HMOX2P30519 316 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 STX2P32856 288 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ETV4P43268 484 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 KRT6CP48668 564 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CCR4P51679 360 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 MANFP55145 182 aaKnown RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 LGALS3BPQ08380 585 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ACSM2AQ08AH3 577 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 FOXL1Q12952 345 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 TRAF3Q13114 568 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CALCOCO2Q13137 446 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CCNIQ14094 377 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 UAP1Q16222 522 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 TMEM176BQ3YBM2 270 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 GGTA1PQ4G0N0 100 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 MIDNQ504T8 468 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 SPIN4Q56A73 249 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ACSM2BQ68CK6 577 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 OR7E24Q6IFN5 339 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 C3orf62Q6ZUJ4 267 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 IKBIPQ70UQ0 350 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 SPATA19Q7Z5L4 167 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 GALNT5Q7Z7M9 940 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 GLCCI1Q86VQ1 547 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 MISPQ8IVT2 679 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms