RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SLC16A1P53985 500 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 RPS26P62854 115 aaKnown RBP18.97■□□□□ 0.63
CPNE1-220ENST00000458038 RAB35Q15286 201 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 SLC22A25Q6T423 547 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
CPNE1-220ENST00000458038 VPS37AQ8NEZ2 397 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 ZNF563Q8TA94 476 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 SAP130Q9H0E3 1048 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 SERHL2Q9H4I8 314 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 LGALS13Q9UHV8 139 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 TRAPPC4Q9Y296 219 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 WDR45Q9Y484 360 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 SLC25A15Q9Y619 301 aa18.97■□□□□ 0.63
CPNE1-220ENST00000458038 RNF212BA8MTL3 300 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 MRPL33O75394 65 aaKnown RBP18.96■□□□□ 0.63
CPNE1-220ENST00000458038 RAD51DO75771 328 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 BMP4P12644 408 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 MAGEA8P43361 318 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 ANXA8L1Q5VT79 327 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 OR4F3Q6IEY1 312 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 C11orf71Q6IPW1 123 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 GRINAQ7Z429 371 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 MUC15Q8N387 334 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 XAGE5Q8WWM1 108 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 TMEM158Q8WZ71 300 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 MUS81Q96NY9 551 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 CACNG6Q9BXT2 260 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 ROPN1BQ9BZX4 212 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-220ENST00000458038 OR51I1Q9H343 314 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 ROPN1Q9HAT0 212 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-220ENST00000458038 EXOSC3Q9NQT5 275 aaKnown RBP18.96■□□□□ 0.63
CPNE1-220ENST00000458038 PARPBPQ9NWS1 579 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 MALT1Q9UDY8 824 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 CDC42EP3Q9UKI2 254 aa18.96■□□□□ 0.63
CPNE1-220ENST00000458038 ANK3Q12955 4377 aaKnown RBP18.95■□□□□ 0.62
CPNE1-220ENST00000458038 PRSS51A0A1B0GVH4 220 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ELOA3DA6NLF2 546 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-220ENST00000458038 E7EQL1 145 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 EIF1BO60739 113 aaKnown RBP18.95■□□□□ 0.62
CPNE1-220ENST00000458038 BPGMP07738 259 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 UQCRC2P22695 453 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 CD40P25942 277 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ARRB2P32121 409 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 HTR3AP46098 478 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 MAP2K6P52564 334 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 LOXL1Q08397 574 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ELOA3BQ3SY89 546 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ZNF544Q6NX49 715 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.95■□□□□ 0.62
CPNE1-220ENST00000458038 CLECL1Q8IZS7 167 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ELOA3Q8NG57 546 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 OR4A15Q8NGL6 344 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 PMM1Q92871 262 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 TNFRSF13CQ96RJ3 184 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 CTPS2Q9NRF8 586 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-220ENST00000458038 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
CPNE1-220ENST00000458038 CENPVL1A0A0U1RR11 272 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 SPAG7O75391 227 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 SLC25A16P16260 332 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 ZNF83P51522 516 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 IRX1P78414 480 aaPredicted RBP18.94■□□□□ 0.62
CPNE1-220ENST00000458038 KCNJ10P78508 379 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 IFFO1Q0D2I5 559 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 MAPK14Q16539 360 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 TYW3Q6IPR3 259 aaKnown RBP18.94■□□□□ 0.62
CPNE1-220ENST00000458038 ARFGAP2Q8N6H7 521 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 OR52N5Q8NH56 324 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 FKRPQ9H9S5 495 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 TMEM160Q9NX00 188 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 TMEM181Q9P2C4 612 aa18.94■□□□□ 0.62
CPNE1-220ENST00000458038 IGHV4-30-2A0A087WSY4 118 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 FAM234BA2RU67 622 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 H7C417 338 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 SNUPNO95149 360 aaKnown RBP18.93■□□□□ 0.62
CPNE1-220ENST00000458038 IGHV3-9P01782 118 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 CSF3P09919 207 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 FAM157CP0CG43 387 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 OR12D1P0DN82 309 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 FABP6P51161 128 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 H3F3AP84243 136 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 TGFBR3Q03167 851 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 CHRNEQ04844 493 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 CHRNB3Q05901 458 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 GABRA6Q16445 453 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 DPY19L1Q2PZI1 675 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 C6orf52Q5T4I8 152 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 ADGRG3Q86Y34 549 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 CMIPQ8IY22 773 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 KIRREL3Q8IZU9 778 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 C17orf78Q8N4C9 275 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 C1orf162Q8NEQ5 155 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-220ENST00000458038 ROPN1LQ96C74 230 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 ARL5BQ96KC2 179 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 INPP5KQ9BT40 448 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 DPY30Q9C005 99 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 DCTN4Q9UJW0 460 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 SLC9A8Q9Y2E8 581 aa18.93■□□□□ 0.62
CPNE1-220ENST00000458038 A0A096LNT2 108 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 RYKP34925 604 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms