RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 COX20Q5RI15 118 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 C11orf71Q6IPW1 123 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 EIF3MQ7L2H7 374 aaKnown RBP14.13□□□□□ -0.15
GPC1-206ENST00000455111 C16orf62Q7Z3J2 963 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 MTDHQ86UE4 582 aaKnown RBP14.13□□□□□ -0.15
GPC1-206ENST00000455111 DPY30Q9C005 99 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 ESRP2Q9H6T0 727 aaKnown RBP14.13□□□□□ -0.15
GPC1-206ENST00000455111 FANCFQ9NPI8 374 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 WDR45Q9Y484 360 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 SLC25A15Q9Y619 301 aa14.13□□□□□ -0.15
GPC1-206ENST00000455111 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 TMEM72A0PK05 275 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 OR5H1A6NKK0 313 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 SULT2B1O00204 365 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 SDHDO14521 159 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 CRLF1O75462 422 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 RAD51DO75771 328 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 ITGA5P08648 1049 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 PGCP20142 388 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 CCNA2P20248 432 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 RPS4Y1P22090 263 aaKnown RBP14.12□□□□□ -0.15
GPC1-206ENST00000455111 SLC1A6P48664 564 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 RPL14P50914 215 aaKnown RBP14.12□□□□□ -0.15
GPC1-206ENST00000455111 MVDP53602 400 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 KCNJ10P78508 379 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 VEZF1Q14119 521 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 PDK3Q15120 406 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 FAM174BQ3ZCQ3 159 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 TIMM23BQ5SRD1 257 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 BHLHB9Q6PI77 547 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 GALNT5Q7Z7M9 940 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 WDR31Q8NA23 367 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 OR52E4Q8NGH9 312 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 CCDC115Q96NT0 180 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 SLC35A5Q9BS91 424 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 RSPO3Q9BXY4 272 aaPredicted RBP14.12□□□□□ -0.15
GPC1-206ENST00000455111 REG4Q9BYZ8 158 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 MEAF6Q9HAF1 191 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 CISD1Q9NZ45 108 aaKnown RBP14.12□□□□□ -0.15
GPC1-206ENST00000455111 CHRNA9Q9UGM1 479 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 B3GALT5Q9Y2C3 310 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 HIVEP2P31629 2446 aa14.12□□□□□ -0.15
GPC1-206ENST00000455111 A0A1W2PP18 115 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 ABCD4O14678 606 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 BIRC5O15392 142 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 GPRIN2O60269 458 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 PMS2P2O95744 297 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 APOBEC1P41238 236 aaKnown RBP14.11□□□□□ -0.15
GPC1-206ENST00000455111 SLC16A1P53985 500 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 IRX1P78414 480 aaPredicted RBP14.11□□□□□ -0.15
GPC1-206ENST00000455111 BST1Q10588 318 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 GABRA6Q16445 453 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 KRT71Q3SY84 523 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 FBXW9Q5XUX1 488 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 OGFOD2Q6N063 350 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 RNF130Q86XS8 419 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 SSU72Q9NP77 194 aaKnown RBP14.11□□□□□ -0.15
GPC1-206ENST00000455111 EXOSC3Q9NQT5 275 aaKnown RBP14.11□□□□□ -0.15
GPC1-206ENST00000455111 POLE3Q9NRF9 147 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 EXD2Q9NVH0 621 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 AIG1Q9NVV5 245 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 MARCOQ9UEW3 520 aaPredicted RBP14.11□□□□□ -0.15
GPC1-206ENST00000455111 OSGIN1Q9UJX0 560 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 SLC35A3Q9Y2D2 325 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.11□□□□□ -0.15
GPC1-206ENST00000455111 CHST2Q9Y4C5 530 aa14.11□□□□□ -0.15
GPC1-206ENST00000455111 GSNP06396 782 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 MYZAPP0CAP1 466 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 LBPP18428 481 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 GGT1P19440 569 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 IDH2P48735 452 aaKnown RBP14.1□□□□□ -0.15
GPC1-206ENST00000455111 WDR4P57081 412 aaKnown RBP14.1□□□□□ -0.15
GPC1-206ENST00000455111 GRINAQ7Z429 371 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 OR52N5Q8NH56 324 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 SLC25A43Q8WUT9 341 aaPredicted RBP14.1□□□□□ -0.15
GPC1-206ENST00000455111 TMEM234Q8WY98 164 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 HTRA1Q92743 480 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 AMBRA1Q9C0C7 1298 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 GRIP2Q9C0E4 1043 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 MALT1Q9UDY8 824 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 BTNL2Q9UIR0 455 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 GPR45Q9Y5Y3 372 aa14.1□□□□□ -0.15
GPC1-206ENST00000455111 IGHV4-30-2A0A087WSY4 118 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 TMED7-TICAM2A0A0A6YYA0 188 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 AGAP5A6NIR3 686 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 E9PBE3 544 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 TFPIP10646 304 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 IDUAP35475 653 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 KHKP50053 298 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 ZNF83P51522 516 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 CDH11P55287 796 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 CSNK2A1P68400 391 aaPredicted RBP14.09□□□□□ -0.15
GPC1-206ENST00000455111 GPAT3Q53EU6 434 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 ANXA8L1Q5VT79 327 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 MAVSQ7Z434 540 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 ZNF100Q8IYN0 542 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 ZIC4Q8N9L1 334 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 ZNF563Q8TA94 476 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 PNPT1Q8TCS8 783 aaKnown RBP14.09□□□□□ -0.15
GPC1-206ENST00000455111 MUS81Q96NY9 551 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms