RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CELF2-AS1Q8N7Q2 184 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 OR9A4Q8NGU2 314 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 TERB2Q8NHR7 220 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 ASB17Q8WXJ9 295 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 BORCS7Q96B45 105 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 DTD2Q96FN9 168 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 OR10A5Q9H207 317 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 OR10A2Q9H208 303 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 GCM1Q9NP62 436 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 GMPR2Q9P2T1 348 aaKnown RBP7.27□□□□□ -1.24
NEDD9-204ENST00000448183 FBXL2Q9UKC9 423 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 UGT2A1Q9Y4X1 527 aa7.27□□□□□ -1.24
NEDD9-204ENST00000448183 METTL15A6NJ78 407 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 NUDT21O43809 227 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 HNRNPA2B1P22626 353 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 GJA5P36382 358 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 RABIFP47224 123 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 CSNK1DP48730 415 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 KCNJ10P78508 379 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 FAPQ12884 760 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 LRRC26Q2I0M4 334 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ARSJQ5FYB0 599 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 CCNJQ5T5M9 372 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 KIAA0895LQ68EN5 471 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM184AQ6ZMB5 413 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF454Q8N9F8 522 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 BBS1Q8NFJ9 593 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR14L1PQ8NHC6 308 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 NMNAT2Q9BZQ4 307 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 TCEAL2Q9H3H9 227 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ELOVL3Q9HB03 270 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 CDH20Q9HBT6 801 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 CSNK1G1Q9HCP0 422 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 B3GNT2Q9NY97 397 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF223Q9UK11 482 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PHRF1Q9P1Y6 1649 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 MBLAC1A4D2B0 266 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 FOXE1O00358 373 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PTGER1P34995 402 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OPRD1P41143 372 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 MTNR1BP49286 362 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 SEC61A1P61619 476 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 FOXK1P85037 733 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 CNN3Q15417 329 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ESCO2Q56NI9 601 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR7E24Q6IFN5 339 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 CREB3L2Q70SY1 520 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 LIX1LQ8IVB5 337 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 NLGN4XQ8N0W4 816 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR10K1Q8NGX5 313 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 SENP5Q96HI0 755 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 SORCS2Q96PQ0 1159 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR5B2Q96R09 309 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 BTBD2Q9BX70 525 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 NXF5Q9H1B4 397 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 DIMT1Q9UNQ2 313 aaKnown RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 VDAC3Q9Y277 283 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 A0A0A6YYC8 382 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 A0A0J9YY10 115 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 C17orf113A0A1B0GUU1 675 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 H0YIV9 168 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 I3L1I5 382 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 LDB3O75112 727 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 C1orf105O95561 183 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 SEMA4FO95754 770 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PDGFAP04085 211 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 TCRBP04435 133 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 HBQ1P09105 142 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF865P0CJ78 1059 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 IRF2P14316 349 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 GABRR1P24046 479 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 RGRP47804 291 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PRLHRP49683 370 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 GAB1Q13480 694 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 FCN2Q15485 313 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 HYAL4Q2M3T9 481 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 C18orf63Q68DL7 685 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 KCTD11Q693B1 232 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 WBP2NLQ6ICG8 309 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 Q6ZSR9 355 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PGAP1Q75T13 922 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 GAREM2Q75VX8 874 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF761Q86XN6 746 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 LYSMD2Q8IV50 215 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PRR22Q8IZ63 422 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 RNF175Q8N4F7 328 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR52R1Q8NGF1 315 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR52E1Q8NGJ3 308 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 OR4K15Q8NH41 348 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM174Q8WUU8 243 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 HAS2Q92819 552 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 C11orf54Q9H0W9 315 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-204ENST00000448183 GPATCH2Q9NW75 528 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 EHFQ9NZC4 300 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 SUSD2Q9UGT4 822 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 PGAP2Q9UHJ9 254 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ADAM29Q9UKF5 820 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 SCML1Q9UN30 329 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 USP3Q9Y6I4 520 aa7.27□□□□□ -1.25
NEDD9-204ENST00000448183 ARID1BQ8NFD5 2236 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms