RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ZNF778Q96MU6 729 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 DCTN5Q9BTE1 182 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 SSBP3Q9BWW4 388 aaPredicted RBP5.86□□□□□ -1.47
SSXP3-201ENST00000442971 RMND5AQ9H871 391 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 SAP30LQ9HAJ7 183 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 HINT3Q9NQE9 182 aaKnown RBP5.86□□□□□ -1.47
SSXP3-201ENST00000442971 DUSP13Q9UII6 198 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 FZR1Q9UM11 496 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 LRCH1Q9Y2L9 728 aa5.86□□□□□ -1.47
SSXP3-201ENST00000442971 ZNF256Q9Y2P7 627 aaPredicted RBP5.86□□□□□ -1.47
SSXP3-201ENST00000442971 GPR55Q9Y2T6 319 aaPredicted RBP5.86□□□□□ -1.47
SSXP3-201ENST00000442971 IGKV3D-15A0A087WSY6 115 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 PRSS29PA6NIE9 313 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SDR42E2A6NKP2 422 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 GJE1A6NN92 205 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 CCNT2O60583 730 aaKnown RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 DNAJA2O60884 412 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 FAM20BO75063 409 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SCELO95171 688 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 IGKV3-15P01624 115 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 IFNA6P05013 189 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 MYBL1P10243 752 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 THRBP10828 461 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 ZNF26P17031 533 aaPredicted RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SLC6A2P23975 617 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 CNTFRP26992 372 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 RYKP34925 604 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 KLK7P49862 253 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 TUBA1BP68363 451 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 TUBA4AP68366 448 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 MFGE8Q08431 387 aaPredicted RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 C17orf67Q0P5P2 114 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 ZNF155Q12901 538 aaPredicted RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 HABP2Q14520 560 aaPredicted RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 AP5B1Q2VPB7 878 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 TMEM155Q4W5P6 130 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 LGALS9CQ6DKI2 356 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 CCDC121Q6ZUS5 278 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 TUBA1AQ71U36 451 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 VN1R5Q7Z5H4 357 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 RNF214Q8ND24 703 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 RBM15BQ8NDT2 890 aaKnown RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SRFBP1Q8NEF9 429 aaKnown RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 CEP70Q8NHQ1 597 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 GIMAP7Q8NHV1 300 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SLC9A6Q92581 669 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 THOC1Q96FV9 657 aaKnown RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 BBS4Q96RK4 519 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 NUDT16L1Q9BRJ7 211 aaKnown RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SERHL2Q9H4I8 314 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 NANOGQ9H9S0 305 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 LIN7BQ9HAP6 207 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 PARVBQ9HBI1 364 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 MOV10Q9HCE1 1003 aaKnown RBP5.85□□□□□ -1.47
SSXP3-201ENST00000442971 TRIM33Q9UPN9 1127 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 PLLPQ9Y342 182 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 NPTNQ9Y639 398 aa5.85□□□□□ -1.47
SSXP3-201ENST00000442971 SORL1Q92673 2214 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 A0A1W2PRB8 838 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 AQP7P3A6NL99 342 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 FOXE1O00358 373 aaPredicted RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 EFNA2O43921 213 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 H2AFYO75367 372 aaKnown RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 PEX14O75381 377 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 FBP1P09467 338 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 MAKP20794 623 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 EPHA3P29320 983 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 GLRXP35754 106 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 CLK3P49761 638 aaKnown RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 ERVFRD-1P60508 538 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 COX10Q12887 443 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 TRAF3Q13114 568 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 ABLIM2Q6H8Q1 611 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 UGT3A1Q6NUS8 523 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 VSIG1Q86XK7 387 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 CCDC50Q8IVM0 306 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 MPP5Q8N3R9 675 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 FITM2Q8N6M3 262 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 ZFP90Q8TF47 636 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 LPGAT1Q92604 370 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 ANP32BQ92688 251 aaKnown RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 PPP1R2P1Q96PQ5 205 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 QKIQ96PU8 341 aaKnown RBP eCLIP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 DCLRE1CQ96SD1 692 aaKnown RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 SPATA25Q9BR10 227 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 SYT11Q9BT88 431 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 ZNF717Q9BY31 904 aaPredicted RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 WNT10AQ9GZT5 417 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 CRLF2Q9HC73 371 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 SAYSD1Q9NPB0 183 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 MED17Q9NVC6 651 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 DDX56Q9NY93 547 aaKnown RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 FLRT3Q9NZU0 649 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 PHF11Q9UIL8 331 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 RIMKLBQ9ULI2 386 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 NOX1Q9Y5S8 564 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 TSSC4Q9Y5U2 329 aaPredicted RBP5.84□□□□□ -1.47
SSXP3-201ENST00000442971 MAD1L1Q9Y6D9 718 aa5.84□□□□□ -1.47
SSXP3-201ENST00000442971 DSPPQ9NZW4 1301 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms