RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 DNAJC3Q13217 504 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 GAMTQ14353 236 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 RFTN1Q14699 578 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 CEBPEQ15744 281 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 PPP1R3AQ16821 1122 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 PARP6Q2NL67 630 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 MARCH8Q5T0T0 291 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 C12orf60Q5U649 245 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 RAET1GQ6H3X3 334 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZCCHC12Q6PEW1 402 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 FAM159AQ6UWV7 190 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 GOLGA7Q7Z5G4 137 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 RANBP3LQ86VV4 465 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 GPATCH11Q8N954 259 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 NDRG1Q92597 394 aaKnown RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 TCEAL4Q96EI5 215 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 CCDC51Q96ER9 411 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 B3GALT6Q96L58 329 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 MBOAT7Q96N66 472 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 MTMR9Q96QG7 549 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 RANBP9Q96S59 729 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 CCT8L2Q96SF2 557 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 TSPAN18Q96SJ8 248 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 P2RY13Q9BPV8 354 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 C19orf43Q9BQ61 176 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 RIOK1Q9BRS2 568 aaKnown RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 TMEM175Q9BSA9 504 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 TRIM9Q9C026 710 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 C1orf21Q9H246 121 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 AZI2Q9H6S1 392 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 AMBNQ9NP70 447 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 YAE1D1Q9NRH1 226 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 CIDEBQ9UHD4 219 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 HOOK1Q9UJC3 728 aaKnown RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 PIN4Q9Y237 131 aaKnown RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 DOCK8Q8NF50 2099 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 SPENQ96T58 3664 aaKnown RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 GOLGA4Q13439 2230 aaKnown RBP2.49□□□□□ -2.01
HMGB3P12-201ENST00000438745 HIVEP1P15822 2718 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 FBN1P35555 2871 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 HIVEP3Q5T1R4 2406 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 F5P12259 2224 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 GON4LQ3T8J9 2241 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 IGHV3OR16-12A0A075B7B8 117 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 NPIPA5A0A0B4J1W7 369 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 LRIT2A6NDA9 550 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 NPIPA5E9PKD4 350 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 H0YL77 283 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 LGALS8O00214 317 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 LAD1O00515 517 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRRG1O14668 218 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 TRDMT1O14717 391 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 IMPA2O14732 288 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 BUB1O43683 1085 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRPSAP2O60256 369 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRAMEF12O95522 483 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 IGHV3-9P01782 118 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 THY1P04216 161 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ALPIP09923 528 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 GSTT2P0CG29 244 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 GSTT2BP0CG30 244 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 HSPD1P10809 573 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PVRP15151 417 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 CCNA2P20248 432 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 U2AF2P26368 475 aaKnown RBP eCLIP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 CCND2P30279 289 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 CHRNA3P32297 505 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 HTR5AP47898 357 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 NUMBP49757 651 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 GMFBP60983 142 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 KLRB1Q12918 225 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 SNX1Q13596 522 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 EIF2B1Q14232 305 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PSMD5Q16401 504 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 TIMM50Q3ZCQ8 353 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 LINC00242Q5T6M2 205 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 TWF2Q6IBS0 349 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 IRGCQ6NXR0 463 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF600Q6ZNG1 722 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 STOX1Q6ZVD7 989 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ERASQ7Z444 233 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ARFGAP2Q8N6H7 521 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 CD177Q8N6Q3 437 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 RNF148Q8N7C7 305 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 OR56B1Q8NGI3 324 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 DLX4Q92988 240 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 MCHR2Q969V1 340 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 TADA1Q96BN2 335 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 DNAJA3Q96EY1 480 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 CARD6Q9BX69 1037 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ATG10Q9H0Y0 220 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 HSD3B7Q9H2F3 369 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ROPN1Q9HAT0 212 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 NGBQ9NPG2 151 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PXMP2Q9NR77 195 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 DCAF13Q9NV06 445 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 P2RX2Q9UBL9 471 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms