RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 CCDC106Q9BWC9 280 aa15.21■□□□□ 0.03
PTCH2-202ENST00000438067 BHLHE41Q9C0J9 482 aaPredicted RBP15.21■□□□□ 0.03
PTCH2-202ENST00000438067 SHARPINQ9H0F6 387 aa15.21■□□□□ 0.03
PTCH2-202ENST00000438067 MALT1Q9UDY8 824 aa15.21■□□□□ 0.03
PTCH2-202ENST00000438067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.2■□□□□ 0.027e-54■■■□□ 18
PTCH2-202ENST00000438067 NPHS1O60500 1241 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 MRPL33O75394 65 aaKnown RBP15.2■□□□□ 0.02
PTCH2-202ENST00000438067 PMS2P2O95744 297 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 AK1P00568 194 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 USF1P22415 310 aaPredicted RBP15.2■□□□□ 0.02
PTCH2-202ENST00000438067 ALDH3A1P30838 453 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 THBS2P35442 1172 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 SOAT1P35610 550 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 EFNA4P52798 201 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 SLC16A1P53985 500 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 MAPK14Q16539 360 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 ARHGAP11BQ3KRB8 267 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 CCDC103Q8IW40 242 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
PTCH2-202ENST00000438067 CLEC4FQ8N1N0 589 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 ARIH2OSQ8N7S6 290 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 WDR31Q8NA23 367 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 DNAJA3Q96EY1 480 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 ARL5BQ96KC2 179 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 RHOXF2Q9BQY4 288 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 DUSP26Q9BV47 211 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 PPCSQ9HAB8 311 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 EML4Q9HC35 981 aaKnown RBP15.2■□□□□ 0.02
PTCH2-202ENST00000438067 CTPS2Q9NRF8 586 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 CHRNA9Q9UGM1 479 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 ATP23Q9Y6H3 246 aa15.2■□□□□ 0.02
PTCH2-202ENST00000438067 LMX1BO60663 402 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 BCAS1O75363 584 aaPredicted RBP15.19■□□□□ 0.02
PTCH2-202ENST00000438067 LY6HO94772 140 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 ITGA5P08648 1049 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 CSF3P09919 207 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 BMP4P12644 408 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 ZNF16P17020 682 aaPredicted RBP15.19■□□□□ 0.02
PTCH2-202ENST00000438067 PGM1P36871 562 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 LSM11P83369 360 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTCH2-202ENST00000438067 CHRNB3Q05901 458 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 FNDC5Q8NAU1 212 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 FAM71CQ8NEG0 241 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 OR52E4Q8NGH9 312 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 PIGXQ8TBF5 258 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
PTCH2-202ENST00000438067 AMBRA1Q9C0C7 1298 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 ZNF350Q9GZX5 532 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 FKRPQ9H9S5 495 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 HDGFL3Q9Y3E1 203 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 SPIN1Q9Y657 262 aaPredicted RBP15.19■□□□□ 0.02
PTCH2-202ENST00000438067 PMF1-BGLAPU3KQ54 211 aa15.19■□□□□ 0.02
PTCH2-202ENST00000438067 PDLIM1O00151 329 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 ANKRD28O15084 1053 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 DNPH1O43598 174 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 FKBP2P26885 142 aaKnown RBP15.18■□□□□ 0.02
PTCH2-202ENST00000438067 APOBEC3AP31941 199 aaPredicted RBP15.18■□□□□ 0.02
PTCH2-202ENST00000438067 RYKP34925 604 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 CLK1P49759 484 aaKnown RBP15.18■□□□□ 0.02
PTCH2-202ENST00000438067 H3F3AP84243 136 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 PGS1Q32NB8 556 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 C16orf62Q7Z3J2 963 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 ADGRG3Q86Y34 549 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 CLECL1Q8IZS7 167 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 ZNF563Q8TA94 476 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 UBLCP1Q8WVY7 318 aaPredicted RBP15.18■□□□□ 0.02
PTCH2-202ENST00000438067 MECRQ9BV79 373 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 OR11A1Q9GZK7 315 aa15.18■□□□□ 0.02
PTCH2-202ENST00000438067 SVEP1Q4LDE5 3571 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 NUP214P35658 2090 aaPredicted RBP15.17■□□□□ 0.02
PTCH2-202ENST00000438067 C8BP07358 591 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 G6PDP11413 515 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 ARRB2P32121 409 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 MAGEA8P43361 318 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 GZMKP49863 264 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 OR2B6P58173 313 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 C9orf135Q5VTT2 229 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 AP1ARQ63HQ0 302 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 ZCCHC23Q6ZST2 131 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 GRINAQ7Z429 371 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 MIPOL1Q8TD10 442 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 ZG16BQ96DA0 208 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 SLC35G5Q96KT7 338 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 C19orf24Q9BVV8 132 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 OR51I1Q9H343 314 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 SLC17A5Q9NRA2 495 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 SLC7A10Q9NS82 523 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 EXD2Q9NVH0 621 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 TMEM181Q9P2C4 612 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 TRAPPC4Q9Y296 219 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 SLC35A3Q9Y2D2 325 aa15.17■□□□□ 0.02
PTCH2-202ENST00000438067 RNF103-CHMP3A0A140T963 221 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 VWC2LB2RUY7 222 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 KIAA0513O60268 411 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 GUSBP08236 651 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 OR12D1P0DN82 309 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 SRD5A1P18405 259 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 CCNA2P20248 432 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 IGFBP5P24593 272 aa15.16■□□□□ 0.02
PTCH2-202ENST00000438067 CLDN8P56748 225 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms