RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DSCR9P59020 149 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 HBA1P69905 142 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 TGFBR3Q03167 851 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 CHRNEQ04844 493 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 TNP2Q05952 138 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ZNF141Q15928 474 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 PDCD2Q16342 344 aaPredicted RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 UGT3A2Q3SY77 523 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ANXA8L1Q5VT79 327 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 FBXW9Q5XUX1 488 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 TNFAIP8L2Q6P589 184 aaPredicted RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 CASP12Q6UXS9 341 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 TMPPEQ6ZT21 453 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 CXXC5Q7LFL8 322 aaKnown RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 C6orf120Q7Z4R8 191 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 NUDCD3Q8IVD9 361 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ARFGAP2Q8N6H7 521 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 OR52N5Q8NH56 324 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 TCP10LQ8TDR4 215 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 XAGE5Q8WWM1 108 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 OIT3Q8WWZ8 545 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 NEUROG1Q92886 237 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 PPP1R36Q96LQ0 422 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ZNF300Q96RE9 604 aaPredicted RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 MDFIQ99750 246 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 DPY30Q9C005 99 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 TRIM2Q9C040 744 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ZNF350Q9GZX5 532 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 FKRPQ9H9S5 495 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 POLE3Q9NRF9 147 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ACER3Q9NUN7 267 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ASB6Q9NWX5 421 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 CHRNA9Q9UGM1 479 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 PRSS50Q9UI38 385 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 MKLN1Q9UL63 735 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 ABCA1O95477 2261 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 DPRXA6NFQ7 191 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 A8MV72 311 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 ZNF814B7Z6K7 855 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 M0R1B8 84 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 OVOL3O00110 214 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 DNPH1O43598 174 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 KIAA0513O60268 411 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 RAMP1O60894 148 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ADAM11O75078 769 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 CPSF4O95639 269 aaKnown RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 IGHV4-39P01824 125 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 SERPINE1P05121 402 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 NUDT17P0C025 328 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 DANCRP0C864 163 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 COX5AP20674 150 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 IGHV1-2P23083 117 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 PTAFRP25105 342 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 MAGEA8P43361 318 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 GATA4P43694 442 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 HTR3AP46098 478 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 FABP6P51161 128 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 CLNS1AP54105 237 aaKnown RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 CLDN8P56748 225 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 OR2B6P58173 313 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 EMX2Q04743 252 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 CHRNB3Q05901 458 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 RAB35Q15286 201 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 DPY19L1Q2PZI1 675 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 SMU1Q2TAY7 513 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 PGGHGQ32M88 737 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ARHGAP11BQ3KRB8 267 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 CHRFAM7AQ494W8 412 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 GPAT3Q53EU6 434 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ABLIM2Q6H8Q1 611 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 OR4F3Q6IEY1 312 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 HMBOX1Q6NT76 420 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 PODNL1Q6PEZ8 512 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 DNAJC14Q6Y2X3 702 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 GRINAQ7Z429 371 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 DTX2Q86UW9 622 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ANKRD46Q86W74 232 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 RIMKLAQ8IXN7 391 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 CLECL1Q8IZS7 167 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 TRIML2Q8N7C3 387 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 DDIT4LQ96D03 193 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 C3orf30Q96M34 536 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ZIM3Q96PE6 472 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 KCNS3Q9BQ31 491 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 TRAF4Q9BUZ4 470 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 CACNG6Q9BXT2 260 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 OR51I1Q9H343 314 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 PARPBPQ9NWS1 579 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ASIC5Q9NY37 505 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 TAS2R16Q9NYV7 291 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 UPB1Q9UBR1 384 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms