RNA–Protein interactions for RNA: ENST00000435616.5

CDCA7-205, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-205ENST00000435616 CHMP6Q96FZ7 201 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 C16orf58Q96GQ5 468 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 SORCS2Q96PQ0 1159 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 LAT2Q9GZY6 243 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 SLC17A5Q9NRA2 495 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 SLC9A8Q9Y2E8 581 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 TRAF6Q9Y4K3 522 aa11.3□□□□□ -0.6
CDCA7-205ENST00000435616 OIP5O43482 229 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 PLIN3O60664 434 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SNUPNO95149 360 aaKnown RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 PROCP04070 461 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ERCC1P07992 297 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ITGA5P08648 1049 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 TACSTD2P09758 323 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ITGA2P17301 1181 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SDC1P18827 310 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 PGCP20142 388 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 GIFP27352 417 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 HPCAL1P37235 193 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 APOBEC1P41238 236 aaKnown RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 MAGEA8P43361 318 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 CCR4P51679 360 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 PRPS1P60891 318 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SKP2Q13309 424 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 EFNB3Q15768 340 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ANKRD26P1Q6NSI1 321 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 BHLHB9Q6PI77 547 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ZYG11AQ6WRX3 759 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 DEF8Q6ZN54 512 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SLC46A3Q7Z3Q1 461 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 C4orf33Q8N1A6 199 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 CCDC63Q8NA47 563 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SFXN5Q8TD22 340 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ZNF317Q96PQ6 595 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ROPN1BQ9BZX4 212 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 BHLHE41Q9C0J9 482 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 BPESC1Q9GZL8 116 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 C12orf65Q9H3J6 166 aaKnown RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ROPN1Q9HAT0 212 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SIRT3Q9NTG7 399 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 ACER3Q9NUN7 267 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 TMEFF2Q9UIK5 374 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-205ENST00000435616 PCDHB14Q9Y5E9 798 aa11.29□□□□□ -0.6
CDCA7-205ENST00000435616 SERINC4A6NH21 518 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 C9JVG2 144 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 G3V2L1 256 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 EIF1BO60739 113 aaKnown RBP11.28□□□□□ -0.6
CDCA7-205ENST00000435616 LY6HO94772 140 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 IGHV3-9P01782 118 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 SERPINF1P36955 418 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 SESN3P58005 492 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 DNAJB13P59910 316 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 MERTKQ12866 999 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 ZSWIM7Q19AV6 140 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 MST1LQ2TV78 715 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 C3orf36Q3SXR2 165 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 CFAP157Q5JU67 520 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
CDCA7-205ENST00000435616 MREGQ8N565 214 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 LINC01356Q8N9X3 169 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 C3orf49Q96BT1 292 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 ZNF775Q96BV0 537 aaPredicted RBP11.28□□□□□ -0.6
CDCA7-205ENST00000435616 FOXN4Q96NZ1 517 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 TSSK3Q96PN8 268 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 KATNB1Q9BVA0 655 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 SAP130Q9H0E3 1048 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 ATAD3AQ9NVI7 634 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 UPB1Q9UBR1 384 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 CHRNA9Q9UGM1 479 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 LGALS13Q9UHV8 139 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 ATP6V1HQ9UI12 483 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 MID2Q9UJV3 735 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 RAB21Q9UL25 225 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 TRAPPC4Q9Y296 219 aa11.28□□□□□ -0.6
CDCA7-205ENST00000435616 DUXAA6NLW8 204 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 TMEM114B3SHH9 223 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 ATP6V1G2-DDX39BF2Z307 99 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 AKAP10O43572 662 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 CHEK2O96017 543 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 GUSBP08236 651 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 CPA3P15088 417 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 MAPK1P28482 360 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 MPGP29372 298 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 CCT3P49368 545 aaKnown RBP11.27□□□□□ -0.61
CDCA7-205ENST00000435616 KHKP50053 298 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 IDH3GP51553 393 aaPredicted RBP11.27□□□□□ -0.61
CDCA7-205ENST00000435616 MAP2K6P52564 334 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 ZNF141Q15928 474 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 LSM12Q3MHD2 195 aaKnown RBP11.27□□□□□ -0.61
CDCA7-205ENST00000435616 CASP12Q6UXS9 341 aa11.27□□□□□ -0.61
CDCA7-205ENST00000435616 EIF3MQ7L2H7 374 aaKnown RBP11.27□□□□□ -0.61
CDCA7-205ENST00000435616 GRINAQ7Z429 371 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms