RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ZNRF4Q8WWF5 429 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 PCBD2Q9H0N5 130 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 PIGUQ9H490 435 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
CDH3-202ENST00000429102 FGF22Q9HCT0 170 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 BCL2L10Q9HD36 194 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 CELSR3Q9NYQ7 3312 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 MED12Q93074 2177 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 TRAPPC13A5PLN9 417 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 P2RX6O15547 441 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 GPANK1O95872 356 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 HIST1H1CP16403 213 aaKnown RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 NAT1P18440 290 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 BTCP35070 178 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 TNK1Q13470 666 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 CMTM4Q8IZR5 234 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 YIPF5Q969M3 257 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 KIAA1143Q96AT1 154 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 RASD2Q96D21 266 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 KCNJ15Q99712 375 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 TMEM27Q9HBJ8 222 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 SLCO1C1Q9NYB5 712 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 KCNE5Q9UJ90 142 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 BRWD1Q9NSI6 2320 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 MDC1Q14676 2089 aaKnown RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 TFP02787 698 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 ZNF3P17036 446 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 DDX6P26196 483 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDH3-202ENST00000429102 PEBP1P30086 187 aaKnown RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 LCN1P31025 176 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 DCTDP32321 178 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 LRRC37A5PQ49AS3 106 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 DCST2Q5T1A1 773 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 CD200R1LQ6Q8B3 271 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 FAM198BQ6UWH4 519 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 TMEM52Q8NDY8 209 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 OR52N1Q8NH53 320 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 ZPLD1Q8TCW7 415 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 TRIM43Q96BQ3 446 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 ZNF649Q9BS31 505 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 MEPEQ9NQ76 525 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 PRDM9Q9NQV7 894 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 ASB6Q9NWX5 421 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 NFKBIL1Q9UBC1 381 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 POLHQ9Y253 713 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 VPS13AQ96RL7 3174 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 SGK494L7N484 410 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 RAF1P04049 648 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 SLC35G6P0C7Q6 338 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 DRD3P35462 400 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 VASPP50552 380 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 ATXN7L3Q14CW9 347 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 RPE65Q16518 533 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 DECR1Q16698 335 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 SLC36A2Q495M3 483 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 ALG10BQ5I7T1 473 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 PYHIN1Q6K0P9 492 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 LSM14AQ8ND56 463 aaKnown RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 FGF11Q92914 225 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 DVL3Q92997 716 aaPredicted RBP11.53□□□□□ -0.56
CDH3-202ENST00000429102 MENTQ9BUN1 341 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 FKBP7Q9Y680 259 aa11.53□□□□□ -0.56
CDH3-202ENST00000429102 H3BUI4 141 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.56
CDH3-202ENST00000429102 MTNR1BP49286 362 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 MAZP56270 477 aaKnown RBP11.52□□□□□ -0.56
CDH3-202ENST00000429102 TFF2Q03403 129 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 ZNF85Q03923 595 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 RGS1Q08116 209 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 GALEQ14376 348 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 DUSP6Q16828 381 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 PRRT3Q5FWE3 981 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 KIAA1324Q6UXG2 1013 aaKnown RBP11.52□□□□□ -0.56
CDH3-202ENST00000429102 CD300LDQ6UXZ3 194 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 TRILQ7L0X0 811 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 FAM174AQ8TBP5 190 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 ARHGDIGQ99819 225 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 KXD1Q9BQD3 176 aa11.52□□□□□ -0.56
CDH3-202ENST00000429102 KRCC1Q9NPI7 259 aaPredicted RBP11.52□□□□□ -0.56
CDH3-202ENST00000429102 DENND4CQ5VZ89 1909 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 TCRBV16S1A1N1A0A5B0 115 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 FGF17O60258 216 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 ADAM11O75078 769 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 CTSBP07858 339 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 OR8G3PP0DMU2 310 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 TLX1P31314 330 aaPredicted RBP11.52□□□□□ -0.57
CDH3-202ENST00000429102 RPS15P62841 145 aaKnown RBP11.52□□□□□ -0.57
CDH3-202ENST00000429102 CST6Q15828 149 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 NDUFAF7Q7L592 441 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 SOSTQ9BQB4 213 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDH3-202ENST00000429102 ERVMER34-1Q9H9K5 563 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 RPS6KB2Q9UBS0 482 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 FRMPD3Q5JV73 1810 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms