RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 OR7A10O76100 309 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 ZNF182P17025 639 aaPredicted RBP24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 ETV5P41161 510 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 PCOLCEQ15113 449 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 CPOQ8IVL8 374 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 NANOGP1Q8N7R0 232 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 BBS1Q8NFJ9 593 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 OR5W2Q8NH69 310 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 MND1Q9BWT6 205 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 TAPBPLQ9BX59 468 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 STRADBQ9C0K7 418 aa24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 PTRH2Q9Y3E5 179 aaKnown RBP24.27■■□□□ 1.48
SH3GL3-202ENST00000427482 SLC22A1O15245 554 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 KLF7O75840 302 aaPredicted RBP24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 PPP1R3DO95685 299 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 NAGAP17050 411 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 HTR1FP30939 366 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 FBXW4P57775 412 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 RAB15P59190 212 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 DOC2BQ14184 412 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 CCDC157Q569K6 752 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 C3orf38Q5JPI3 329 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 SLC35F1Q5T1Q4 408 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 DCAF12Q5T6F0 453 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 HGDQ93099 445 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 DEPDC7Q96QD5 511 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 MGLLQ99685 303 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 ZNF337Q9Y3M9 751 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 LRRN3E7EW58 273 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 CSO75390 466 aaKnown RBP24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 PGCP20142 388 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 ITPKBP27987 946 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 TACR3P29371 465 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 P2RX1P51575 399 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 ROR2Q01974 943 aaKnown RBP24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 GID4Q8IVV7 300 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 LRRC17Q8N6Y2 441 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 PROKR2Q8NFJ6 384 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 EDEM2Q9BV94 578 aa24.26■■□□□ 1.47
SH3GL3-202ENST00000427482 FAM183AA6NL82 134 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 NDUFB2O95178 105 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 BCL10O95999 233 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 HSMCR30P0CW71 290 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 INSM1Q01101 510 aaPredicted RBP24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 CBFBQ13951 182 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 TOMM34Q15785 309 aaPredicted RBP24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 PLBD1Q6P4A8 553 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 MISPQ8IVT2 679 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 RACGAP1Q9H0H5 632 aa24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 H2AFY2Q9P0M6 372 aaPredicted RBP24.25■■□□□ 1.47
SH3GL3-202ENST00000427482 SOCS6O14544 535 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 GMFGO60234 142 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 APOL3O95236 402 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 RGS6P49758 472 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 E2F1Q01094 437 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 EGR4Q05215 589 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 PAQR6Q6TCH4 344 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 OR5M3Q8NGP4 307 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 OR2Y1Q8NGV0 311 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 LIPHQ8WWY8 451 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 RPL3LQ92901 407 aaKnown RBP24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 TIMMDC1Q9NPL8 285 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 MYOTQ9UBF9 498 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 MYL12BO14950 172 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 CDC40O60508 579 aaKnown RBP eCLIP24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 PEPDP12955 493 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 ETV1P50549 477 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 RPS4XP62701 263 aaKnown RBP24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 SPHARQ15513 63 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 ZNF74Q16587 644 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 ZNF362Q5T0B9 420 aaPredicted RBP24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 NIPAL3Q6P499 406 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 ARHGAP11AQ6P4F7 1023 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 ELP5Q8TE02 316 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 RNF138Q8WVD3 245 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 TMCO6Q96DC7 493 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 ZNF700Q9H0M5 742 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 TMEM9BQ9NQ34 198 aa24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 EXOGQ9Y2C4 368 aaKnown RBP24.24■■□□□ 1.47
SH3GL3-202ENST00000427482 IGHV1-45A0A0A0MS14 117 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 RIIAD1A6NNX1 92 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 STK17BO94768 372 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 NUDT14O95848 222 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 MYL12AP19105 171 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 GADD45AP24522 165 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 LSM3P62310 102 aaKnown RBP24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 B4GALNT2Q8NHY0 566 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 DUSP19Q8WTR2 217 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 OPALINQ96PE5 141 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 CHRNA9Q9UGM1 479 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 OSGIN1Q9UJX0 560 aa24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 EXOSC1Q9Y3B2 195 aaKnown RBP24.23■■□□□ 1.47
SH3GL3-202ENST00000427482 GP1BBP13224 206 aa24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 HK1P19367 917 aa24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 VBP1P61758 197 aa24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 TSTQ16762 297 aaKnown RBP24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 ISXQ2M1V0 245 aa24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 LYPD8Q6UX82 237 aa24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 RAB11FIP2Q7L804 512 aa24.22■■□□□ 1.47
SH3GL3-202ENST00000427482 NUP54Q7Z3B4 507 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms