RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TRAF6Q9Y4K3 522 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 NDUFS8O00217 210 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 LYPLA1O75608 230 aaPredicted RBP10.64□□□□□ -0.71
LIMS2-210ENST00000413578 CHEK2O96017 543 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 AK1P00568 194 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 CSTAP01040 98 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 GUSBP08236 651 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 UBTFL6P0CB48 400 aaPredicted RBP10.64□□□□□ -0.71
LIMS2-210ENST00000413578 PGCP20142 388 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 MAPK1P28482 360 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 PGM1P36871 562 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 APOBEC1P41238 236 aaKnown RBP10.64□□□□□ -0.71
LIMS2-210ENST00000413578 NR4A2P43354 598 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 PHC1P78364 1004 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 MAPK14Q16539 360 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 ARHGAP11BQ3KRB8 267 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 LSM12Q3MHD2 195 aaKnown RBP10.64□□□□□ -0.71
LIMS2-210ENST00000413578 SPDYE7PQ495Y7 208 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 C1QTNF12Q5T7M4 302 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 IL17RELQ6ZVW7 336 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 CCDC103Q8IW40 242 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 DEPDC4Q8N2C3 294 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 UBE2J2Q8N2K1 259 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 MNS1Q8NEH6 495 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 C1orf162Q8NEQ5 155 aaPredicted RBP10.64□□□□□ -0.71
LIMS2-210ENST00000413578 PIGXQ8TBF5 258 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 OIT3Q8WWZ8 545 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 TMEM234Q8WY98 164 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 BOD1Q96IK1 185 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 PPP3R2Q96LZ3 170 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 SORCS2Q96PQ0 1159 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 C1QTNF6Q9BXI9 259 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 ATAD3AQ9NVI7 634 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 KCNS2Q9ULS6 477 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 HDGFL3Q9Y3E1 203 aa10.64□□□□□ -0.71
LIMS2-210ENST00000413578 IGHV4-61A0A0C4DH41 118 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 LOC100289279A0A1B0GTE1 492 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 ATP6V1G2-DDX39BF2Z307 99 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 KIAA0513O60268 411 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 TRIM13O60858 407 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 PEX11AO75192 247 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 MRPL33O75394 65 aaKnown RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 STX11O75558 287 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 CYP7B1O75881 506 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 SHBGP04278 402 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 BMP4P12644 408 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 CLK1P49759 484 aaKnown RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 PDLIM4P50479 330 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 CHRNB3Q05901 458 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 GPR68Q15743 365 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 C6orf136Q5SQH8 315 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 GRINAQ7Z429 371 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 DDIASQ8IXT1 998 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 CCDC63Q8NA47 563 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 MIPOL1Q8TD10 442 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 ANP32BQ92688 251 aaKnown RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 C3orf30Q96M34 536 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 C16orf45Q96MC5 204 aaPredicted RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 C1orf50Q9BV19 199 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 BHLHE41Q9C0J9 482 aaPredicted RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 OR11A1Q9GZK7 315 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 SAP130Q9H0E3 1048 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 FKRPQ9H9S5 495 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 SLC7A10Q9NS82 523 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 MKLN1Q9UL63 735 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 TRAPPC4Q9Y296 219 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 AMDHD2Q9Y303 409 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 FLVCR1Q9Y5Y0 555 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 SPIN1Q9Y657 262 aaPredicted RBP10.63□□□□□ -0.71
LIMS2-210ENST00000413578 ATP23Q9Y6H3 246 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 PMF1-BGLAPU3KQ54 211 aa10.63□□□□□ -0.71
LIMS2-210ENST00000413578 DUXAA6NLW8 204 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 COPEO14579 308 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 ANKRD28O15084 1053 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 NPHS1O60500 1241 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 PGRP06401 933 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 TFPIP10646 304 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 IMPDH2P12268 514 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 KRT4P19013 534 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 MATN1P21941 496 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 FKBP2P26885 142 aaKnown RBP10.62□□□□□ -0.71
LIMS2-210ENST00000413578 ARRB2P32121 409 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 FUT5Q11128 374 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 GGTLC2Q14390 218 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 SLC17A1Q14916 467 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 TSPO2Q5TGU0 170 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 IL23RQ5VWK5 629 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 TYW3Q6IPR3 259 aaKnown RBP10.62□□□□□ -0.71
LIMS2-210ENST00000413578 EMBQ6PCB8 327 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 BHLHB9Q6PI77 547 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 C6orf120Q7Z4R8 191 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 LSRQ86X29 649 aaPredicted RBP10.62□□□□□ -0.71
LIMS2-210ENST00000413578 ZHX1-C8orf76Q96EF9 292 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 SOX7Q9BT81 388 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 DUSP26Q9BV47 211 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 CHODLQ9H9P2 273 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms